Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03198 ATGGGATATGATATTGTGGAGCAATTAGCAGAGCTAGGGGCCACTATACACACTTGTGCTAGAAACGAAGCTCAACTCAATGAATGCTTACATCAATGGGCCACAAAAGAATACAAAATTACTGGTTCAGTCTGTGATGTGACATCTCGTGCACAAAGAGAGGAGCTCATAAGTAGAGTGTCTTCTGAATTCAACGGCAAACTCAATATCCTTGTGAACAACGTGGGAAGAAACATACATAAACAGACACTAGAATTTACAGAAGAAGATTTTTCATTTCTGGTGAATACAAATCTTGAATCTGCATTTCACATAAGCCAACTTGCACATCCACTCCTAAAAGCTTCAGATTCTGCAAGCATTATTTTCATATCCTCCGTTGGTGGGATAGCATCACTAAATGTAGGAACTATATATAGTGCAGCAAAAGGTGCAATAAACCAACTGACAAAAAATTTGGCATGTGAGTGGGCTAAAGACAACATAAGGACTAATTGTGTGGCACCTGGCCCAATTAGAACCCCTCATGCCGAAGAACACTTAAAAGATGATAAGCTTCTTAATGGTTTCATTACAAGAACCCCTCTTGGACGTATTGGAGAACCAGAAGAAGTGTCTTCTTTGGTGGCATTCCTTTGCTTACCTGCAGCCTCTTTCATAACAGGACAAATTATTTGTATAGATGGAGGTCTCTCTCGCCGGCGGCGAGTCACCGCCGCAACAGTGCTTAACCGTCCAGACCACCGCTGTCCACTCTCACCCTCTCTCCATCTCGCCGCCGCACCACTGCTCTCCATCTCTCTCACTCTCGCTGCCGATTCGATTCGAGGCTCTCTAACATTCCTAGAGTCGCCTTCCATGTTTTGTTTTGTTTGA 876 0.4349 MGYDIVEQLAELGATIHTCARNEAQLNECLHQWATKEYKITGSVCDVTSRAQREELISRVSSEFNGKLNILVNNVGRNIHKQTLEFTEEDFSFLVNTNLESAFHISQLAHPLLKASDSASIIFISSVGGIASLNVGTIYSAAKGAINQLTKNLACEWAKDNIRTNCVAPGPIRTPHAEEHLKDDKLLNGFITRTPLGRIGEPEEVSSLVAFLCLPAASFITGQIICIDGGLSRRRRVTAATVLNRPDHRCPLSPSLHLAAAPLLSISLTLAADSIRGSLTFLESPSMFCFV 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03198 291 PRINTS Glucose/ribitol dehydrogenase family signature 66 77 IPR002347 -
Trre7g03198 291 PRINTS Glucose/ribitol dehydrogenase family signature 139 158 IPR002347 -
Trre7g03198 291 PRINTS Glucose/ribitol dehydrogenase family signature 113 129 IPR002347 -
Trre7g03198 291 PRINTS Glucose/ribitol dehydrogenase family signature 195 215 IPR002347 -
Trre7g03198 291 PRINTS Glucose/ribitol dehydrogenase family signature 160 177 IPR002347 -
Trre7g03198 291 FunFam Short-chain dehydrogenase reductase 1 239 - -
Trre7g03198 291 PANTHER TROPINONE REDUCTASE 2 232 IPR045000 GO:0016491
Trre7g03198 291 Pfam Enoyl-(Acyl carrier protein) reductase 1 232 - -
Trre7g03198 291 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 126 154 IPR020904 GO:0016491
Trre7g03198 291 Gene3D - 1 234 - -
Trre7g03198 291 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 232 IPR036291 -
Trre7g03198 291 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 66 77 IPR002347 -
Trre7g03198 291 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 158 IPR002347 -
Trre7g03198 291 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 119 127 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03198 Trre-Chr7 30127226 30137186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03198 1 232 Miscellaneous Gene Families AT2G29290 59.483 4.53e-99 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03198 K08081 - gmx:100780806 365.54