Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03152 ATGGCATATCTTCCCCAATTAAACTTTCCCATCCCCATCTCTTCCTACACCATCCCTAAAACCCCAATCCCCATTTTCTCATTTCACTACACTCTCCCCTTTTCCACTTCAATTCTTTCCTCTCTCCCTCGCCGGAGCCTCTCCCGCTCCATACCACAATTTAGCGCCACTGAATTCTCGGCCACCACTGGCGACGACGACGACGAGCTATTACCAGACGAGTTGGATAACGAGGTTGATTATTCAGATGAGGATGACGACGTTGATGTCGTTGCGCTCGAGCAAGAAGCAAAGGAAGTCGCGCTGGAGTATTCAAGCTCTCTTTCTCGCGTTTTGACTATCGAAGAAGAGAGAAGTAATCTAAAGGAAACGCGTAAAAACTCCAAGAGCAGTAAACCGAAGAAAAAAATTATCCCCGACAATCTTCTCCCAAGGATTGCTATTGTTGGAAGACCGAACGTTGGCAAGTCAGCATTATTTAATCGTCTAGTTGGGGGAAACAAGGCTATCGTGGTGGATGAACCTGGGGTTACTAGGGATCGTTTATATGGCCGATCATATTGGGGAGATCATGAATTCATGGTGGTGGATACTGGTGGTGTTATTACTGTTTCAAAATCACAGAGTAGTGTTATGGAAGAGCTGGACATTAGTACAACTATCGGTATGGATGGTATTTCCCTTGCTTCTAGAGAGGCTGCTGTTGCCAGGATGCCATCAATGATTGAGAAACAAGCTATTGCAGCTGTGGAAGAATCACCTGTTATTATTTTCCTGGTTGATGGTCAGGCAGGTTTAACAGCAGCTGATGTGGAGATTGCTGATTGGCTACGTAAAAACTACTCAAATAAAAGTATCATTCTTGCAGTTAACAAGTGTGAATCTCCACGGAAAAGAATTATGCAGGTGTCTGAGTTTTGGTCCCTTGGGTATGAACCAATTGCTATATCAGCTATATCAGGGTCTGGAACTGGAGAGCTTCTTGACCTTGTTTGTTCAGGGATTCAGAAAGTTGAGGAGCCAATTAATATTGTTGAAGAAGAAGATTATGTTCCAGCTATTTCAATTGTTGGTAGACCAAATTTTGGCAAAAGTAGTATTTTGAATAATTTGATTATATTATGCATTCATGAACCAGAGCCAAATAATATTGTTGAAGAAGAAGATTATGTTCCAGCTATTTCAATTGTTGGTAGACCAAATGTTGGCAAAAGTAGCATTTTGAATGCACTGGTTGGTGAGGACAGAACAATAGTCAGCCCCATCAGTGGCACTACACGTGATGCTATTGATACTGAATTTACTGGACCAGATGGCCAGAAGTTCCATCTTATTGATACTGCTGGAATCAGGAAAAGAACAACCGTAGCCTCAGCTGGAAGCACAACAGAGGCTTTGTCGGTGAATCGAGCATTTCGTGCTATTCGGCGTTCTGATGTTGTTGCTCTTGTCATTGAGGCCATGGCTTGTATCACTGAACAGGACTACAAGATAGCTGAAAGGATAGAAAAAGAAGGGAAAGGTTGTGTGATTGTTGTAAACAAGTGGGATACAATACCAAATAAAAATCAGCAGACTGCATTATTCTATGAGCAAGATGTCAGAGAGAAGCTTCGTTTACTTGTCTGGGCTCCAATTGTTTATTCTACTGCTCTAGCTGGCCAAAGTGTTGACAAGATCATTGTTGCTGCTAGTGAAGTCGAAAAGGAGAGATCAAGAAGACTGGGTACTTCTATATTGAATCAAGTAGTACGGGAATCAGTAACTTTTAAGCCTCCTCCCAGGACACGCGGTGGAAAAAGAGGGCGTGTTTACTATTGCACTCAGGCTGCTATAAGGCCGCCTACGTTTGTGTTTTTTGTCAATGATGCAAAACTTTTTCCTGAAACTTATCGGCGTTTTATGGAGAAGCAACTGCGTTCAAATGCAGGATTTCTTGGTACTCCCATTCGGCTTCTGTGGCGCAGCAGAAGAAAAATGGAAAAAGACGAAGGAAAAAAGGTTACAAGGACCAAAGAAAATCGTGCGCCACACCGTCGAAAATTGATCTCAGCTACACAGTAG 2064 0.4273 MAYLPQLNFPIPISSYTIPKTPIPIFSFHYTLPFSTSILSSLPRRSLSRSIPQFSATEFSATTGDDDDELLPDELDNEVDYSDEDDDVDVVALEQEAKEVALEYSSSLSRVLTIEEERSNLKETRKNSKSSKPKKKIIPDNLLPRIAIVGRPNVGKSALFNRLVGGNKAIVVDEPGVTRDRLYGRSYWGDHEFMVVDTGGVITVSKSQSSVMEELDISTTIGMDGISLASREAAVARMPSMIEKQAIAAVEESPVIIFLVDGQAGLTAADVEIADWLRKNYSNKSIILAVNKCESPRKRIMQVSEFWSLGYEPIAISAISGSGTGELLDLVCSGIQKVEEPINIVEEEDYVPAISIVGRPNFGKSSILNNLIILCIHEPEPNNIVEEEDYVPAISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPDGQKFHLIDTAGIRKRTTVASAGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDYKIAERIEKEGKGCVIVVNKWDTIPNKNQQTALFYEQDVREKLRLLVWAPIVYSTALAGQSVDKIIVAASEVEKERSRRLGTSILNQVVRESVTFKPPPRTRGGKRGRVYYCTQAAIRPPTFVFFVNDAKLFPETYRRFMEKQLRSNAGFLGTPIRLLWRSRRKMEKDEGKKVTRTKENRAPHRRKLISATQ 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03152 687 Gene3D - 574 658 IPR015946 -
Trre7g03152 687 Gene3D - 76 202 IPR027417 -
Trre7g03152 687 CDD EngA2 394 567 - -
Trre7g03152 687 FunFam GTPase Der 570 658 - -
Trre7g03152 687 CDD EngA1 147 335 - -
Trre7g03152 687 PRINTS GTP1/OBG GTP-binding protein family signature 394 414 IPR006073 GO:0005525
Trre7g03152 687 PRINTS GTP1/OBG GTP-binding protein family signature 468 486 IPR006073 GO:0005525
Trre7g03152 687 PANTHER GTPASE DER 384 680 - -
Trre7g03152 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 388 661 IPR027417 -
Trre7g03152 687 NCBIfam small GTP-binding protein domain 392 560 IPR005225 GO:0005525
Trre7g03152 687 Gene3D - 242 382 IPR027417 -
Trre7g03152 687 ProSiteProfiles EngA-type guanine nucleotide-binding (G) domain profile. 392 572 IPR031166 GO:0005525
Trre7g03152 687 Pfam 50S ribosome-binding GTPase 145 292 IPR006073 GO:0005525
Trre7g03152 687 Pfam 50S ribosome-binding GTPase 394 515 IPR006073 GO:0005525
Trre7g03152 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 371 IPR027417 -
Trre7g03152 687 Hamap GTPase Der [der]. 143 658 IPR016484 GO:0005525
Trre7g03152 687 MobiDBLite consensus disorder prediction 661 687 - -
Trre7g03152 687 Gene3D - 386 572 IPR027417 -
Trre7g03152 687 Pfam KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 574 655 IPR032859 -
Trre7g03152 687 FunFam GTPase Der 141 341 - -
Trre7g03152 687 FunFam GTPase Der 387 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03152 Trre-Chr7 29507194 29527608 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03152 - - gmx:100777588 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g03152 7 29507194 29527608 Trre7g03152 7 29507194 29527608 ECH