Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03030 ATGGCAGTTACATCGTTGTTCCGCACTATTCATAGAGCTTCATCAGTTATCAAATCCTCGTTTTCGATGTCTCCCAGGTTAGTTGGGAAGGGTCAATTATATTCTATATGTTCTCCATTAAGGCATTGTGTGCATTTTGAGAAGCAAGGTTTTTTGTGGGGTTTGAGAGAGTTGAGTTATGGGAAGGTTAATCTTGTGATAAGGGATGGGAAGACTAAGTTTGAGGCTCATGAGGTTGAGCCTCCAAGGAAAGATAAGTGGAAGACTAAGAAGAAGTTGAAGATGCAAAGGAAGAGAGAGAAGGAGAAAAGGAAAGCGGCGAATAGGAGAGATCCTAGCCGACTTGGTGTTAAAGGGAAGAAAAAGAAGCATAAGTTTGCTACTCCTGAAGAGAGGATCCAGTTCAAGATTGACAATGCGAGAGTCAAAGAGGCGTTACTCATTGAAAGGCTCAAACGATACGAAGTTGCTAAAGCTCAGGGTCCCGAAGTAAAACCAGATGGCTTGACGGGGGAGGAACGGTTTTATCTGAAGAAAATGGCTCAGAAGAGTTCTAATTATCTACAAGTTGGAAGAAGAGGATTATTTGGAGGGGTTATTCTCAATATGCATTTGCATTGGAAGAAACATGAGACTGTTAAGTGCATTTGCAAGCCTTGTAAACCTGGTCAAGTACATGAGTATGCACAAGAACTTGCCAGATTGAGTGGTGGTATTCCAATTCACATCATAGGTGATGACACTATCATATTTTATCGTGGAAAGAACTATATACGGCCTGAGGTTATGTCGCCGGTAGATACATTGTCCAAGAAAAAGGCACTTGAAAAATCCAAGTATGAGCAATCACTAGAGTCAGTGAGGCGCTTCATTGCTATCGCGGAGAAAGAATTGGAGCTATATCACAGACACGTTGCACTTTATGGCGACCCTAGCAACCGCAATCCCTTGTCTATACTCGACGGTCCAAGTAGAAGCTCCATGGTAAAGAGGAATCACGATGAAAAGAACCATGATTCGAGTAGCTATTATCTTTCAGAAACAGAAGCTGATTCCTCACAGTCGGAGCTATCAGAATCTGAAGATAACTTTGAAAACGGGAACTTGTCAATGAGTGAATCAGATTCTGAAGAGGGCGACATGTTGGGTTCCGATGAAGATCAAGAAAGAGAAGTATATTTTAGTAAAATGCAAAATCAAGATTCATCATCACTGTCTAAACATGCCAACCAGTATAAGAATCAACATTTGTTATCTTAA 1260 0.4111 MAVTSLFRTIHRASSVIKSSFSMSPRLVGKGQLYSICSPLRHCVHFEKQGFLWGLRELSYGKVNLVIRDGKTKFEAHEVEPPRKDKWKTKKKLKMQRKREKEKRKAANRRDPSRLGVKGKKKKHKFATPEERIQFKIDNARVKEALLIERLKRYEVAKAQGPEVKPDGLTGEERFYLKKMAQKSSNYLQVGRRGLFGGVILNMHLHWKKHETVKCICKPCKPGQVHEYAQELARLSGGIPIHIIGDDTIIFYRGKNYIRPEVMSPVDTLSKKKALEKSKYEQSLESVRRFIAIAEKELELYHRHVALYGDPSNRNPLSILDGPSRSSMVKRNHDEKNHDSSSYYLSETEADSSQSELSESEDNFENGNLSMSESDSEEGDMLGSDEDQEREVYFSKMQNQDSSSLSKHANQYKNQHLLS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03030 419 Pfam CRS1 / YhbY (CRM) domain 169 253 IPR001890 GO:0003723
Trre7g03030 419 MobiDBLite consensus disorder prediction 77 123 - -
Trre7g03030 419 MobiDBLite consensus disorder prediction 87 104 - -
Trre7g03030 419 MobiDBLite consensus disorder prediction 312 419 - -
Trre7g03030 419 Gene3D - 169 267 IPR035920 -
Trre7g03030 419 MobiDBLite consensus disorder prediction 327 342 - -
Trre7g03030 419 ProSiteProfiles CRM domain profile. 167 264 IPR001890 GO:0003723
Trre7g03030 419 Coils Coil 90 110 - -
Trre7g03030 419 SUPERFAMILY YhbY-like 169 263 IPR035920 -
Trre7g03030 419 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 58 414 IPR040286 -
Trre7g03030 419 MobiDBLite consensus disorder prediction 395 419 - -
Trre7g03030 419 SMART CRS1_YhbY_2 169 253 IPR001890 GO:0003723
Trre7g03030 419 MobiDBLite consensus disorder prediction 343 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03030 Trre-Chr7 27540259 27543042 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03030 - - psat:127100837 588.956