Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03026 ATGGGGAAGCCTTTGATATATGAGATCTTGGAAAAACCAGCCACAAGTTGTATTATAGCAATATGCAGTGCAATTTGGTTTTATATACAGAAGAAAAACATTGGTTATTCACATGTTGGTTTGAGTTATGAGACTGCTATGGAAGGACAATATTGGAGAATAATCACTTCTGCATTCTCTCATGTAAGTATAATTCATCTTGTTTTCAATATGAGTGCACTTTGGAGTCTTGGGGTTGTGGAGCAATTGGATCATCTTGGCCTTGGTGTTGAGTATTATTTGCAGTATACACTTGTGTTGATTGTTGTATCAGGAGTTTTGGTTTTGGCAATGTATCACTTGTTGATTCAAAGATTTAAGGTTGATTATTTTCGTCGAGTCACGGCTGTTGGATATTCATGTGTTGTTTTTGGTTGGATGACGATTCTTTCTGTCAAGCAACCTTCCTCTAAGTTGGAGCTTTTTGGATTTCTTTCGCTTCCTATTAGTTTTGCTCCGTTTGAATCGCTTGTTTTCACTTCGATAATTGTTCCTCAGGCAAGTTTTATTGGTCATTTATCTGGGATTGTTGTTGGATATGCTATAGCTTGGGGTTTGATTCATGGGATGACAAATTATTGGGCACTTTCGTTGTTGGGTTGGATTGTTCTTGTGTTTGTTTTGAGTTTGAAGAAATCCGGTGCACTTGACCTGAGCTTCATTGAGATTGAATCTGTTACTGATCCATCTTTACCGTCTGTGCGGTTTTTGGGATCTGGCAATGGCAGAACCCTGCAGATGAGTGCATTGCCTGATGGAAATGTTGAACTTGTCTAA 816 0.3848 MGKPLIYEILEKPATSCIIAICSAIWFYIQKKNIGYSHVGLSYETAMEGQYWRIITSAFSHVSIIHLVFNMSALWSLGVVEQLDHLGLGVEYYLQYTLVLIVVSGVLVLAMYHLLIQRFKVDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLELFGFLSLPISFAPFESLVFTSIIVPQASFIGHLSGIVVGYAIAWGLIHGMTNYWALSLLGWIVLVFVLSLKKSGALDLSFIEIESVTDPSLPSVRFLGSGNGRTLQMSALPDGNVELV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03026 271 Pfam Rhomboid family 48 201 IPR022764 GO:0004252|GO:0016020
Trre7g03026 271 FunFam RHOMBOID-like protein 13 9 201 - -
Trre7g03026 271 SUPERFAMILY Rhomboid-like 13 199 IPR035952 -
Trre7g03026 271 Gene3D - 10 201 IPR035952 -
Trre7g03026 271 PANTHER RHOMBOID PROTEASE 15 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03026 Trre-Chr7 27469186 27470001 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03026 - - gmx:100818954 487.648