Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03019 ATGGCGATTGACGATCGCTTCACAGATTTCAACCCTAAAACTTGTGTGGTTTTAGGCGGAAGAGGATTCTTAGGAAAATCGTTGGTCTTAAAGCTATTGAAACTCAGTAACTGGATCGTCCGAGTCGCCGATTCCACTCACTCACTCCAACTTCATCACTCCGAATCTCTCCTCTCCGAAGCTCTCTCTTCTTCTCGCGCTTCTTACTTTCATCTCGACCTTACCGATAAACACCGCATCGCCAAAGTTCTAGAAGGTTCTTCCGTCGTTTTCTATATGGATGTTGATGGTTCTAATAATAGCGATGATTTCTACCGTTGTTATAAGCTAATAGTTCAAGGTGCGAAGAATGTGATTACTGCTTGCAGAGAATGTAAAGTGAAACGCCTCATATACAACAGTTCTGCAGATGTTGTATTTGATTGTTTGCATAATGGAGATAAATCGCCGGCATATCTGTGGAAAGTTGATAACATGTTAATTGACCTTAAGGCTCAAGCAGAAGCTTTGGTCTTGGATGCTAATGATATTGATGGAGTTTTGACATGCTCACTTCGTCCTAGTAATGTATTTGGTCCTGGTGACACAGAATTTGTGCCATATATTCTGAAGTTAGCAAGATATGGTGTCACAAAGTTTATTATAGGGACTGGTGATAATCTGTCAGACTTCACCTTTTATGAGAATGTTACTCACGCCCATATCTGTGCAGAAGAAGCCTTAAATTTCCAAACCATTTCTGTGGCCGGAAAGGCATTTTTTATCACAAATCTCGAGCCTATAAGGTTCTGGGAATTTCTGTCGCTTTTATTGGAAGGTCTTGGATATCAAAGGCCATTCATCAAACTTCCTGCCAATTTAGTGCAATACATTCTCTCAGTTTTAAAGTGGTTTTATGAAAAGTTGGGGCCCAGATACTTCAATTATCCTTTATTAGTTCAATTTTTTCAGTTAGCTTTACACACCCGAACTTTCAACTGCTCTGCAGCTCAAAAAGATATTGGATACTCACCAATAGTCTCCCTTGAGGAAGGTGTCACATTAACCATAGAAGCATTCTCTCATTTAGCTAAAGATTCATCTTTTTCGAGATGCTGCGGGTCTGATGATCGGTCAAAAGCAGATAAGCTGCTTGGCAGTGGAAAAGTGGCTGACATTTTGTTGTGGAGAAACGAGAAGGCATCCTTCACATATTTCCTTGGGCTAGTTTTTTTGTTTTATTGGTTTTTTCTTTCTGGAAGCACTTTTATATCATCTGCTGCAAGGCTTTTGCTGCTTGTGACTTTGCTTCTATGTGGACATGGTTTTCTGCCATCAAAGCTATTTGGTTTCCCTATACCGAAGGTGCCCGTGTCTAATTTTAAGATCTCTGATATGGCAGCAAAAGATTCAGTTGCAATTATAGTACATATATGGAACAAGGGGTTTCAAAATATAAAGGAACTGGGCCAAGGGGGCGATTGGTCTACATTTTTCAAGGTTTCGGTTTTTCTTTACCTTCTGAAGTTGATCCTGTCAAAGTTGTTGATAACATTCATAGGCATGGGACTGGTCTTTGCATTTATGGCATTCTTTGTTTATGAGCAATATGAATCAGAAATTGATGAACTTGCGGATTTTCTAACCGCTAGTTTGAAGGAGTTCATGGTATATTTGATGAGAATTTTACCTGTCTCTGTATCACGGGCACGGCTTCTGCATTATGGTGACAACTTCAGCGTTCCCAAAGACCAGGATGGGGGAAAGATCTGA 1752 0.4013 MAIDDRFTDFNPKTCVVLGGRGFLGKSLVLKLLKLSNWIVRVADSTHSLQLHHSESLLSEALSSSRASYFHLDLTDKHRIAKVLEGSSVVFYMDVDGSNNSDDFYRCYKLIVQGAKNVITACRECKVKRLIYNSSADVVFDCLHNGDKSPAYLWKVDNMLIDLKAQAEALVLDANDIDGVLTCSLRPSNVFGPGDTEFVPYILKLARYGVTKFIIGTGDNLSDFTFYENVTHAHICAEEALNFQTISVAGKAFFITNLEPIRFWEFLSLLLEGLGYQRPFIKLPANLVQYILSVLKWFYEKLGPRYFNYPLLVQFFQLALHTRTFNCSAAQKDIGYSPIVSLEEGVTLTIEAFSHLAKDSSFSRCCGSDDRSKADKLLGSGKVADILLWRNEKASFTYFLGLVFLFYWFFLSGSTFISSAARLLLLVTLLLCGHGFLPSKLFGFPIPKVPVSNFKISDMAAKDSVAIIVHIWNKGFQNIKELGQGGDWSTFFKVSVFLYLLKLILSKLLITFIGMGLVFAFMAFFVYEQYESEIDELADFLTASLKEFMVYLMRILPVSVSRARLLHYGDNFSVPKDQDGGKI 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03019 583 Gene3D - 6 357 - -
Trre7g03019 583 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 13 353 - -
Trre7g03019 583 ProSiteProfiles Reticulon domain profile. 383 557 IPR003388 -
Trre7g03019 583 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 355 IPR036291 -
Trre7g03019 583 Pfam Reticulon 383 539 IPR003388 -
Trre7g03019 583 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 16 284 IPR002225 GO:0003854|GO:0006694|GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03019 Trre-Chr7 27406162 27412513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03019 14 360 Lipid Metabolism Gene Families AT2G33630 28.226 1.43e-32 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03019 K23558 - gmx:100814147 837.795