Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02994 ATGGTGTATGCTGCTGCTTCACTCTCATTCTCTCCAATTCCGCCTTTCACTCCCAAAAACCCAAAATGCATTTCACCTTCCCATTTTTTTAAATTTTCCAACAAATTCAATTTCAGACCTTTGCCAACGATTCCATCTTGTTGCTCTCAGAAAAGAAGCATTGCACTGCCGGAATATGGGCAAGATGAGAGAATTGAGACAGTGAACACTGCGTCAATCACAAACAAGCCCGTTTTGTTCAGCAATTCACCAGCGAGTCAGCAGAGTGGCCTGCCTCCTCTAGTCAGCGCATTGAAAGCTTCAGCTGAAGAAAATGCTGCCACTTTTCACTTTCCTGGACATAACAGAGGCCATGCCGCTCCGGCTTCGATGACTCAACTCATTGGAATAAGACCATATGTTCATGATTTGCCTGAGCTCCCTGAACTCGACAACCTATTTTGTCCCCAAGGGCCCATATTAGAAGCACAAACAAAAGCAGCCAAACTGTTTGGATCATCAGAGACATGGTTTCTTGTCGGAGGCACTACTTGTGGGATCCAGGCAGCAATAATGGCAACCTGTTCACCGGGAGAATTTCTGATTCTTCCGAGGAATTGTCATTTATCGGCTATATCTGCAATGGTATTATCTGGTGCAGTGCCTAAATACATTGTTCCTGACTATAAAAATGATTGGGACATCGCTGGCTGTGTCACTCCATTACAGGTATTGAATGCCATCCAGGAACTAGAATTGGAAGGAAAAAAAGCCGCAGCAGTTTTCAACACTTCACCTACTTATCATGGTATTTGCAGTAACTTGAATGACATATCTGAGTTGTGTCATTCACGTAAGATTCCTTTGATCGTTGATGAAGCTCACGGTGCACATCTAGGATTTCATTCTGAACTGCCTAGCTCAGCCCTCCAGCAAGGTGCTGATCTAACTATACAGTCTACTCACAAGGTTCTATGCTCTCTAACTCAGTCATCTATGCTCCACATGTCAGGCGACATTGTAGATAAAGAAAAAATATCCAGGTGTCTCCAAACTCTCCAAACCACAAGTCCTAGTTACCTGCTTTTGGCATCTTTAGATGCTGCTAGAGCTCAACTTGGTGAAAGCCCTGAAATTGTATTTAACCAAGCGATTCAATTAGCAAATGAAACCAAGTGCTTACTAAAACGAATCTCTGGCATCTCAGTGCTGGATAATTCAAGCTTTCCAAACTTTCCTGCGATTGATCCTTTGCGGCTTACTGTAGGTTTTTGGGAACTTGGTTTATCAGGTTACGAAGCAGATGAAATCTTATATAGGGATTTTGGAATCGTCTGTGAACTCGTTGGGAATAAATCTATCACTTATGCACTGAATCTTGGAACTTGTAGGGACCATGTCCAAAGGCTTTTATCGGGAATAAAGCATCTAGCTGCAACATGTTCTTCCATTAAGCAGCCCAAAGACAGATTGGTTACTGATCATGCACCCTTTGATGATATAATCATGAGCTTAATCCCTAGAGATGCATTTTTTGCAAGTAAAAGAAAAGTAACAGTGAAGGAGAGCATTGGTAAGATTTCAGGGGAGCTTATATGTCCATACCCTCCAGGCATACCGGTATTGATCCCCGGTGAGGTTATTACTGAGAGAGCCGTCGATTATCTACTCCATGTAATCGGTAAAGGTGCTGATATTAGTGGAGCATCTGATCCCTTACTTTCTTCTATAGTTATCTGCAATGTACAGTAA 1731 0.4252 MVYAAASLSFSPIPPFTPKNPKCISPSHFFKFSNKFNFRPLPTIPSCCSQKRSIALPEYGQDERIETVNTASITNKPVLFSNSPASQQSGLPPLVSALKASAEENAATFHFPGHNRGHAAPASMTQLIGIRPYVHDLPELPELDNLFCPQGPILEAQTKAAKLFGSSETWFLVGGTTCGIQAAIMATCSPGEFLILPRNCHLSAISAMVLSGAVPKYIVPDYKNDWDIAGCVTPLQVLNAIQELELEGKKAAAVFNTSPTYHGICSNLNDISELCHSRKIPLIVDEAHGAHLGFHSELPSSALQQGADLTIQSTHKVLCSLTQSSMLHMSGDIVDKEKISRCLQTLQTTSPSYLLLASLDAARAQLGESPEIVFNQAIQLANETKCLLKRISGISVLDNSSFPNFPAIDPLRLTVGFWELGLSGYEADEILYRDFGIVCELVGNKSITYALNLGTCRDHVQRLLSGIKHLAATCSSIKQPKDRLVTDHAPFDDIIMSLIPRDAFFASKRKVTVKESIGKISGELICPYPPGIPVLIPGEVITERAVDYLLHVIGKGADISGASDPLLSSIVICNVQ 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02994 576 CDD Orn_deC_like 93 385 IPR000310 GO:0003824
Trre7g02994 576 Pfam Orn/Lys/Arg decarboxylase, C-terminal domain 509 551 IPR008286 GO:0003824
Trre7g02994 576 Gene3D - 92 371 IPR015421 GO:0003824
Trre7g02994 576 PANTHER ARGININE DECARBOXYLASE 65 574 - -
Trre7g02994 576 Gene3D - 475 570 - -
Trre7g02994 576 Pfam Orn/Lys/Arg decarboxylase, major domain 92 397 IPR000310 GO:0003824
Trre7g02994 576 SUPERFAMILY Ornithine decarboxylase C-terminal domain 430 573 IPR036633 GO:0003824
Trre7g02994 576 SUPERFAMILY PLP-dependent transferases 92 470 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02994 Trre-Chr7 27098697 27102609 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02994 - - psat:127101168 909.057