Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02993 ATGTGGTGGAAGAAATTTTCACTTCCACTCCTGCAGCCTGCAGCTTTGAGCCTCAAAAGCCAAAAATGCTTTCAATTATCTGAATTTTCCAACAAATTCAATTTGAGGTCTTCGCCAATGATTCTGTCTTGTTGCTCTCAGGAAGGAAGCACTGCAATTCAAGAATATGGGCAAGATGAGAGCAATGGGACGGCGAACACCGCATCAATCACAAACAACCACGTTTTGTGCAGCAATTCACCAGAGTTTCAGAAGAGAAGCCAACCTCCTCTAGTCAGTGCACTGAAAGCCTCAGCTGAAGTAAATGCTGCCAGTTTTCACTTTCCTGGACATAACAGAGGCCATGCCGCTCCTGTTTCATTGACTCGACTCATTGGAATAAGACCGTACGCTCATGATTTGTCCAGCATTCCGGAACTTGACAACCTCTTTTGTCCCCAAGGAGCCATATTAGAAGCACAAAAAGAAGCTGCTAAACTGTTTGGATCATCAGAGACATGGTTTCTTGTCAACGGTACTACTTGTGGAGTCCAGGCAGCAATAATGGCAACCTGCTCACCAGGAGAATTTCTGATTCTTCCGAGGAATTGTCATTTATCGGCTATATCTGCCTTGGTATTATCTGGTGCAGTGCCTAAGTACATTGTTCCTGACTACAAAAATGATTGGGACATCGCTGGTGGCGTCACTCCATTACAAGTATTGAACACTATCCAGGAACTAGAATTCGAAGGAAAAAAAGCAGCAGCAGTTTTCATCACTTCACCTACTTATCATGGTGTTTGCAGTAATGTGCGCGGCATTTCTGAGTTGTGTCATTCTCGGAAAATTCCTTTGATTGTTGATGAAGCTCATGGTGCACATCTAGGATTTCATTCTAAACTGCCTAGCTCAGCCGTCCAGCAGGGGGCTGATCTCATTGTACAGTCTACTCACAAGGTTCTTTGCTCTCTCACTCAGTCATCTATGCTGCACATGTCAGGTGACATTGTAGATAAAGAAAAAATATCTAGGTGTCTCCAAACTCTCCAAAGCACAAGTCCTAGTTACTTGCTTTTGGCATCCCTAGATGCTGCTAGATCTCAACTTGGTGAAAGCCCTGAAATTGTATTCGACCAAGCGATTGCATTAGCCAATGAAGCAAAGTGCTTGCTAAAGCGAATCCCTGGAATCTCGGTGCTAGATAATTCAAGCTTTCCAAACTTTCCTGCATTTGATCCATTGCGGCTTACTATAGGTTTTTGGGAGCTTGGTATTTCAGGTTACAAAGCAAATGAAGTCTTATGCAGGGATTTCGGAATCGTACGTGAACTTGTTGGGAACAAATCTATCACTTATGTACTTAATCTTGGAACTTGTAGAGACCATGTACAAAGGCTTATATCGGGAGTGAAGTATTTAGCTGCAACATATTCTACTATTCAGCAACCTAAAGACAGGTTGCTTCTTGATCATGCACCCTTTGATGATATAATGATGAGATTGACCCCTAGAGATGCATTTTTTGCAAGTAAAAGAAAAGTAACGGTGAAGGAGAGCATTGGTAAGGTTTCGGGGGAGCTTATATGTCCATACCCTCCAGGCATACCAGTATTGATCCCCGGCGAGGTTATTACTGAGAGAGCTGTAGATTATCTACTCAATGTAAGAAGTAAAGGTGCTGATATTACTGGAGCATCTGACCCCTTACTTTCTTCTATAGTTGTCTGCAATGTAGCTGATGAGAGCTATTAG 1734 0.4279 MWWKKFSLPLLQPAALSLKSQKCFQLSEFSNKFNLRSSPMILSCCSQEGSTAIQEYGQDESNGTANTASITNNHVLCSNSPEFQKRSQPPLVSALKASAEVNAASFHFPGHNRGHAAPVSLTRLIGIRPYAHDLSSIPELDNLFCPQGAILEAQKEAAKLFGSSETWFLVNGTTCGVQAAIMATCSPGEFLILPRNCHLSAISALVLSGAVPKYIVPDYKNDWDIAGGVTPLQVLNTIQELEFEGKKAAAVFITSPTYHGVCSNVRGISELCHSRKIPLIVDEAHGAHLGFHSKLPSSAVQQGADLIVQSTHKVLCSLTQSSMLHMSGDIVDKEKISRCLQTLQSTSPSYLLLASLDAARSQLGESPEIVFDQAIALANEAKCLLKRIPGISVLDNSSFPNFPAFDPLRLTIGFWELGISGYKANEVLCRDFGIVRELVGNKSITYVLNLGTCRDHVQRLISGVKYLAATYSTIQQPKDRLLLDHAPFDDIMMRLTPRDAFFASKRKVTVKESIGKVSGELICPYPPGIPVLIPGEVITERAVDYLLNVRSKGADITGASDPLLSSIVVCNVADESY 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02993 577 PANTHER ARGININE DECARBOXYLASE 59 571 - -
Trre7g02993 577 SUPERFAMILY PLP-dependent transferases 89 463 IPR015424 -
Trre7g02993 577 Pfam Orn/Lys/Arg decarboxylase, major domain 89 391 IPR000310 GO:0003824
Trre7g02993 577 SUPERFAMILY Ornithine decarboxylase C-terminal domain 428 571 IPR036633 GO:0003824
Trre7g02993 577 CDD Orn_deC_like 90 382 IPR000310 GO:0003824
Trre7g02993 577 Gene3D - 89 368 IPR015421 GO:0003824
Trre7g02993 577 Gene3D - 471 571 - -
Trre7g02993 577 Pfam Orn/Lys/Arg decarboxylase, C-terminal domain 493 552 IPR008286 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02993 Trre-Chr7 27088218 27093910 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02993 - - psat:127101168 872.848