Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02980 ATGTCGTACGACGATGTGGAGATTGAAGACATGGAGTGGAATGAGGAATTGCAGTCATACACATATCCATGTCCATGCGGAGACTTGTTCCAAATCACCAAGGAAGATCTCAAGCTTGGTGAAGAGATCGCTCGTTGCCCTAGTTGTTCTCTCTATATCACTGTCATCTACAACATGGAAGATTTTCTTGGCGATTCTGATCAACACAAGGGTATTCAGCCTTCCAAGCAACAACCTGTTACTGTTGCTTGA 252 0.4405 MSYDDVEIEDMEWNEELQSYTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDFLGDSDQHKGIQPSKQQPVTVA 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02980 83 SUPERFAMILY CSL zinc finger 2 70 IPR036671 -
Trre7g02980 83 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 2 58 IPR007872 -
Trre7g02980 83 Gene3D DPH Zinc finger 1 83 IPR036671 -
Trre7g02980 83 PANTHER DPH3 HOMOLOG-RELATED 4 65 IPR044248 GO:0017183|GO:0046872
Trre7g02980 83 FunFam Diphthamide biosynthesis 3 1 79 - -
Trre7g02980 83 Pfam CSL zinc finger 4 58 IPR007872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02980 Trre-Chr7 26944825 26945076 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02980 K15455 - gmx:100500529 164.081