Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02960 ATGGTGGATGTATACACTGTGAAGGTGGAAGAAGCAAGGCCTGCAACTCATGAAAAACCATCAGCAGGTCCTGTGTATAGATGCATCTATGCTAAAGATGGTTTATTGGAGCTACCTTCTCATTTTCAATCTCCATGGGACTTTCTCAGGGATTCTGCTACGAGGAGCCCCAGCAAACCAATGTTGGGTCGGCGTCGCAAAACAGATTCTACTAAGGCTGGTCCCTATGAGTGGCTCACATATGAAGAAGCTTATAATGCTGCTATCCAAATTGGTTCTGCCATGAGGACCCGTGGTGTCAATTCTGGAGACCGTTGTGGCATATATGGATCCAATTGTCCTGAATGGATACTTGCAATGGAGGCTTGTAACAGCTATGCAGTAACATATGTTCCCTTATATGACACACTTGGTCCTAATGCTGTAGAATTTATCATAAACCATGCTGAAGTTTCGATAGCATTTGTACAACAAAGCAAGATCCCTTCTATTTTGTCATGTCTTGGTCGATGCGCCAGTCTTAAAACTATTGTGAGTTTCGGTAATGTTTCAACCACACAAAAGAAAGAAGCCGAGGAACTTGGCGTATCCTGCTTCTCATGGGGAGAGTTTCTCCAGCTGGGAAATTTGGATTTGGATTTACCATTAAAAAACAAGACTAGCATCTGCACAATCATGTACACAAGTGGAACAACAGGTGAACCAAAAGGTGTCATTATTAAGAATGAGGCTTTCATGACTGAAGTGTTGTCCATCGACCAAATACTTTCTCTAACAGACAAAGCGGCAACCGAAGACGATGTGTACTTCTCGTTTCTTCCTCTTGCTCATGTATATGATCAGATAATGGTGACCTATAGCATCTACAAGGGTTCCTCAATTGGATTTTGGCAAGGCGATATAAGATTCTTAATGGAAGATATTCAGACGTTGCAACCAACTATATTTTGTGGCGTTCCTCGAATTTATGACCGTGTTTATGCTGGTATCAACAGCAAAATTTCATCGGAAGGATCATGGAAAAAGACATTGTTTCAGTATGCATATAACTACAAATTGGGATATCTAAACAGTGGTCTTCCACAAGACAAAGCAGCACCTTGGACTCATAAGCTTGTGTTTGACAAGATAAAACATGCATTGGGCGGACGAGTTCGACTCATGCTATCAGGAGCTGCTCCTTTGTCTATGAACGTGGAGGAGTTTCTGAGGGTCACTTTCGGAGCTACGCTGGCACAAGGATACGGTCTCACCGAAAGTTGTGCCGGGTGTTTCAGTGCAATAACCAATGTGTTTTCTATGACGGGAACGGTTGGAGTCCCCATGACAACCATTGAAGCAAGGCTTGAATCCGTGCCTGAGATGGGATATGATGCGCTCTCCAATCAACCCCGTGGAGAAATTTGCCTGAGAGGGAACACCTTGTTCTCCGGTTACCACAAGCGTCAAGATTTAACGGAAGAGGTTATCGTTGATGGTTGGTTTCATACAGGTGACATAGGAGAATGGCTACCAAATGGAGCAATGAAAATTATTGACAGAAAAAAGAACATCTTCAAATTGTCTCAAGGAGAATATGTTGCTGTGGAGAATATTGAAAACAAGTACTTACAGTGTCCTCTTATAACTTCGATTTGGGTCTACGGAAATAGTTTTGAATCTTTCTTGGTGGCAATTGTGATTCCTGAAAGACAAGCCCTCGAGGATTGGGCAGCGAAGCATGATTTGTCTGATGATTTTAAATCTTTATGTGAAAATCTAAAGGCAAGAAAATATATTTTGGATGAGCTCAACAGCGTTGGTCAGAAACATCAACTTAGAGGTTTTGAGCTGATAAAAGCAGTTCATCTGGAACCAACTCCCTTTGATGTGGAGAGAGATCTAATAACTCCAACATTCAAATTGAAAAGACCACAATTATTAAAGCACTATAAGGATTGCATTGACCTGCTATACAAGGAAGCAAAGGGAGCAATGGTGTGA 1983 0.4191 MVDVYTVKVEEARPATHEKPSAGPVYRCIYAKDGLLELPSHFQSPWDFLRDSATRSPSKPMLGRRRKTDSTKAGPYEWLTYEEAYNAAIQIGSAMRTRGVNSGDRCGIYGSNCPEWILAMEACNSYAVTYVPLYDTLGPNAVEFIINHAEVSIAFVQQSKIPSILSCLGRCASLKTIVSFGNVSTTQKKEAEELGVSCFSWGEFLQLGNLDLDLPLKNKTSICTIMYTSGTTGEPKGVIIKNEAFMTEVLSIDQILSLTDKAATEDDVYFSFLPLAHVYDQIMVTYSIYKGSSIGFWQGDIRFLMEDIQTLQPTIFCGVPRIYDRVYAGINSKISSEGSWKKTLFQYAYNYKLGYLNSGLPQDKAAPWTHKLVFDKIKHALGGRVRLMLSGAAPLSMNVEEFLRVTFGATLAQGYGLTESCAGCFSAITNVFSMTGTVGVPMTTIEARLESVPEMGYDALSNQPRGEICLRGNTLFSGYHKRQDLTEEVIVDGWFHTGDIGEWLPNGAMKIIDRKKNIFKLSQGEYVAVENIENKYLQCPLITSIWVYGNSFESFLVAIVIPERQALEDWAAKHDLSDDFKSLCENLKARKYILDELNSVGQKHQLRGFELIKAVHLEPTPFDVERDLITPTFKLKRPQLLKHYKDCIDLLYKEAKGAMV 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02960 660 ProSitePatterns Putative AMP-binding domain signature. 225 236 IPR020845 -
Trre7g02960 660 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 18 652 - -
Trre7g02960 660 Pfam AMP-binding enzyme 51 522 IPR000873 -
Trre7g02960 660 SUPERFAMILY Acetyl-CoA synthetase-like 38 652 - -
Trre7g02960 660 CDD LC-FACS_euk 74 653 IPR045311 GO:0004467|GO:0006631
Trre7g02960 660 Gene3D - 34 514 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02960 Trre-Chr7 26465138 26470299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02960 5 656 Acyl Lipid Metabolism Gene Families AT1G64400 54.656 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02960 K01897 - gmx:100790068 1162.52