Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02919 ATGATGTCTTTGAGAAATCCTATGATGAACAACTACTCAAATCAATGTCTTCTCAAAACCCATTTTCTCAAAGTTCCAATCTTTAATCCCTTCTTCAAATTCAATTCATACCCATATGCTTCAAACAGAACTCAAACCCTCTCATTCACCATTAACTGCAACCTCAAAAAAAATGGGAAGAACTTGTTGTCTCAGAAGATTGTCTTATCAGAAGCTTCTCCTCCACCACTCACACAGGATAATGATGAAATCAATGGTGGGAATGTTTCAGTGAGTTCAAAGAATAAGAAAGGACTTTATGGTGTGGTTAATAAGTTGACCAAAAAGGTGTTGCAGATTCTCTCTAATTTGCCTTTGGCTATTGGAGAAATGTTCATCATTGCTTTTTTAATGGGTTTGGGCACTTTTATTGATCAAGGTCAGAAACCTGAGTTTTATTTCCAAAACTACCCTGAAGATCATCCTGTATTAGGATTTTTTACTTGGAGATGGATTTTTTTCCTTGGTTTTGATCACATGTATTCAGCCCCTATATTTCTTGGAATGTTGGCTCTTCTCGGCGCATCCCTAATTGCCTGCACTTACACAACACAGCTCCCACTCATCAAGGTTTCTAAAAGATGGTCGTTTATGCACTCTACCGAGGCTATACGTAAGCAGGAGTTTTCAGAATCATTGCCAAGAGCATCGATACAAGATGTTGGTACTATATTAATGGGAGCTGGATATGAGGTATTCTTGAAAGGACCGACTTTGTATGCTTTTCGCGGACTTGCTGGTCGGCTAGCTCCTGTTGGAGTTCATATAGCACTTCTGTTGATAATGGGTGGAGGAACATTAAGTGCTGCAGGGAGCTTTAGAGGTTCAGTCACTGTGCCACAGGGGCTGAATTTTGTTGTCGGAGATGTTCTCGGCCCTACAGGCTTTCTTTCCATTCCAACGGATGCCTTTAATACAGAGATTCATGTCAACAGATTCTCTATGGACTATTTTGAAAGTGGAGAGGTTTCACAGTTCCGCACCGATCTTTCCCTCTTGAACATGGATGGGAAAGAAGTAATGAGGAAAACAATTAGTGTAAATGATCCTTTAAGATATAATGGTATCACCATATACCAAACAGATTGGAGTATTTCAGCACTGCAAATTCTCAAAGACAATGAAGGACCTTATAACTTGGCTATGGCACCTCTAAAGATCAATGGAGATAAGAAACTTTATGGCACTTTTCTACCTGTTGGAGATATTAACTCTCCTGATGTTAAGGGAATATCTATGCTTGCTCGCGACCTGCAGTCAATTGTCCTTTATGATAAGGAAGGGAAATTCGCAGGAGTTAGACGACCAAATTCAAAGCTTCCAATCAACATCGATGGCTCAGAAATTGTAATTGTTGATGCAATAGGGAGTAGTGGCTTGGACTTGAAGACTGACCCTGGCGTGCCAGTTGTATATGCTGGATTTGGTGCTCTAATGCTTACTACTTGCATCAGCTATTTATCTCATTCACAGATATGGGCCTTACAAGATGGAACATCAGTCGTTATTGGAGGGAAGACTAACAGAGCAAAGTTAGAGTTTCCGGACGAGATGAACCTCTTGCTTGACAAAATCCCTGAAATAGTCGAATCATCATCTCTATCTAAGAAAACTGATAGCATGGTTAGTTAG 1671 0.401 MMSLRNPMMNNYSNQCLLKTHFLKVPIFNPFFKFNSYPYASNRTQTLSFTINCNLKKNGKNLLSQKIVLSEASPPPLTQDNDEINGGNVSVSSKNKKGLYGVVNKLTKKVLQILSNLPLAIGEMFIIAFLMGLGTFIDQGQKPEFYFQNYPEDHPVLGFFTWRWIFFLGFDHMYSAPIFLGMLALLGASLIACTYTTQLPLIKVSKRWSFMHSTEAIRKQEFSESLPRASIQDVGTILMGAGYEVFLKGPTLYAFRGLAGRLAPVGVHIALLLIMGGGTLSAAGSFRGSVTVPQGLNFVVGDVLGPTGFLSIPTDAFNTEIHVNRFSMDYFESGEVSQFRTDLSLLNMDGKEVMRKTISVNDPLRYNGITIYQTDWSISALQILKDNEGPYNLAMAPLKINGDKKLYGTFLPVGDINSPDVKGISMLARDLQSIVLYDKEGKFAGVRRPNSKLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCISYLSHSQIWALQDGTSVVIGGKTNRAKLEFPDEMNLLLDKIPEIVESSSLSKKTDSMVS 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02919 556 Pfam ResB-like family 420 531 IPR007816 -
Trre7g02919 556 Pfam ResB-like family 119 383 IPR007816 -
Trre7g02919 556 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 60 545 IPR023494 -
Trre7g02919 556 Hamap Cytochrome c biogenesis protein Ccs1 [ccs1]. 107 536 IPR023494 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02919 Trre-Chr7 25907268 25910936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02919 21 556 Miscellaneous Gene Families AT1G49380 68.681 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02919 K07399 - gmx:100807003 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02919 7 25907268 25910936 Trre7g02919 7 25907268 25910936 ECH