Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02902 ATGGAGGCGTACAAGAAGGTTATGATTGTTGGTATGTTGTTGGTCATTGCCAATGTTACGATGTTGGTTAATGGTCAGTCGACGTTTTGTCGCACGACAAAAGCAGGCCTCGATTCATGCAAACCGTATGTAAATGGAGATAACTCTGTTGATAAACAAAATCCATCCTCTGATTGTTGCTCAGCTATTGCTAAAGCTGATCTTCAATGTCTTTGTCGTTACAAGAATTATCTTCCCTTATATGGTATTGATCCAGAACAAGCCATGAAACTTCCAGTTAATTGTAAGCTTATGAACAACTTCCACTGCTAG 312 0.3942 MEAYKKVMIVGMLLVIANVTMLVNGQSTFCRTTKAGLDSCKPYVNGDNSVDKQNPSSDCCSAIAKADLQCLCRYKNYLPLYGIDPEQAMKLPVNCKLMNNFHC 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02902 103 Gene3D - 27 103 IPR036312 -
Trre7g02902 103 PANTHER LIPID BINDING PROTEIN-RELATED 7 103 IPR039265 GO:0005504|GO:0009627
Trre7g02902 103 CDD nsLTP_like 30 97 IPR044741 -
Trre7g02902 103 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 30 102 IPR036312 -
Trre7g02902 103 SMART aai_6 30 103 IPR016140 -
Trre7g02902 103 Pfam Probable lipid transfer 17 102 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02902 Trre-Chr7 25633642 25633953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02902 5 103 Acyl Lipid Metabolism Gene Families AT5G48490 37.624 6.90e-15 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02902 - - aprc:113865173 120.168