Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02850 ATGGATGAAAAACTCATACAGCGATTGGAATCGGCGGTGTCGCGTTTAGAGTCTATATCCACCGGATTCCATCCCGCCACTTCACCGTCCGACGGTTCCGATGCGGCAGCCGATCCATCCATTGTTGCTTACGGCGATCTGGTTGATCAATTTGTCGGTAGGGTTTCCAGTGCTGCCGAGATTATTGGTGGACAGGTGTTGGAGGTTACTAATAGGGTGAAGGATGCTTTTGCTGTTCAGAAAGAGCTTTTGATTAAGCTCAAAACCACTCAGAAACCTGACCCTGCCGGGCTTGCTGAATTTCTGAAACCATTGAATGAAGTGATCACAAAAGCTGCCGCATTGGCAGAAGGAAGGAGATCTGATTTTTTTAATCACTTGAAAGCTGCGGTTGACAGTCTTTCTGCTCTAGCATGGATTGCATTTACTGGGAAGGGTTGCGGTATGAGTATGCCTGTTGCACATGTGGAAGAAAGTTGGCAAATGGCTGAGTTTTATAGCAACAAGGTACTTGTAGAGTACAGAAACAAAGACCCAAATCATGTTGAGTGGGTCAAAGCTCTGAAAGAGTTGTATATACCTGGATTGAGGGATTATGTGAAGAGCTTTCATCCATTAGGCCCTGTATGGAGTCCAACAGGAAAAGTAGTTGTCCCATCAAAAGCTAATGCTTCTGGTGCACCTTCTGCCCCTCCTCCTCCGCCTGCATCTCTCTTTAGTTCTGAATCATCTCAGGCTTCATCTTCTAAGCCAAAAGTGGGGATGTCTGCTGTTTTTCAAGAGATTGGTACAAGAGATGTCACAGCAGGTCTGAGAAAGGTTACGGATGATATGAAGACTAAGAATCGCACAGATAGATCTGGAGTTGTTGGCAGTACTGTAAAAGAAAGTCAAGCTAGTGCACGTGCAGTTTCTAAAGTAGGACCTCCGAAGTTAGAACTTCAAATGGGCCGCAAGTGGGTTGTTGAGAATCAAATTGAGCAGAAAAGCTTGGTCATTGAAGATTGTGATTCAAAGCAGTCTGTATATGTTTATGGATGTAAAAACTCTGTGTTGCAGATTCAAGGCAAGGTCAACAATATAACTATTGACAATTGCAAAAAGACGGGAGTTGTATTTAAGGATGTTGTTGCAGCTTTTGAGATTGTAAACAGTAATGGGGTTGAGGTTCAATGCCAGGGTTCGGCTCCTACAATTTCGGTGGACAACACTTCTGGCTGCCAGATATATCTGAGCAAAGACTCTTTAGAAACATCCATATCTACAGCAAAGTCAAGTGAGATCAATGTATTAGTTCCTAACACTGAGTCTGATGGTGATTGGGTGGAGCATTCTTTACCACAACAGTACATTCACGTATTCAAGGAAGGCCGATTTGAAACAACTCCAGCTTCTCACTCTGGAGGTTAA 1410 0.4383 MDEKLIQRLESAVSRLESISTGFHPATSPSDGSDAAADPSIVAYGDLVDQFVGRVSSAAEIIGGQVLEVTNRVKDAFAVQKELLIKLKTTQKPDPAGLAEFLKPLNEVITKAAALAEGRRSDFFNHLKAAVDSLSALAWIAFTGKGCGMSMPVAHVEESWQMAEFYSNKVLVEYRNKDPNHVEWVKALKELYIPGLRDYVKSFHPLGPVWSPTGKVVVPSKANASGAPSAPPPPPASLFSSESSQASSSKPKVGMSAVFQEIGTRDVTAGLRKVTDDMKTKNRTDRSGVVGSTVKESQASARAVSKVGPPKLELQMGRKWVVENQIEQKSLVIEDCDSKQSVYVYGCKNSVLQIQGKVNNITIDNCKKTGVVFKDVVAAFEIVNSNGVEVQCQGSAPTISVDNTSGCQIYLSKDSLETSISTAKSSEINVLVPNTESDGDWVEHSLPQQYIHVFKEGRFETTPASHSGG 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02850 469 ProSitePatterns CAP protein signature 1. 5 17 IPR018106 -
Trre7g02850 469 SMART carp 347 384 IPR006599 -
Trre7g02850 469 SMART carp 385 422 IPR006599 -
Trre7g02850 469 Pfam Adenylate cyclase associated (CAP) C terminal 309 466 IPR013912 GO:0003779|GO:0007010
Trre7g02850 469 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 40 235 IPR036222 -
Trre7g02850 469 Gene3D - 40 215 IPR036222 -
Trre7g02850 469 Pfam Adenylate cyclase associated (CAP) N terminal 3 55 IPR013992 GO:0003779|GO:0007010
Trre7g02850 469 MobiDBLite consensus disorder prediction 275 295 - -
Trre7g02850 469 FunFam Adenylyl cyclase-associated protein 308 468 - -
Trre7g02850 469 Gene3D - 308 468 IPR016098 -
Trre7g02850 469 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 2 468 IPR001837 GO:0003779|GO:0007010
Trre7g02850 469 FunFam Adenylyl cyclase-associated protein 40 215 - -
Trre7g02850 469 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 309 468 IPR036223 -
Trre7g02850 469 ProSiteProfiles C-CAP/cofactor C-like domain profile. 309 446 IPR017901 -
Trre7g02850 469 MobiDBLite consensus disorder prediction 221 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02850 Trre-Chr7 24857664 24861776 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02850 K17261 - gmx:100793194 729.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02850 7 24857664 24861776 Trre7g02850 7 24857664 24861776 ECH