Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02731 ATGTTAGGTGCTATTTCAGTAACCCACCCAGCAAGCACACTTTTATCATCTTGGACATATAGTCAAACATTTGGAAACAGGTTATTATTATCAGGTAACAAACCAAGGACAGTATCAATGTCTCTCAGTAACAGAAATAGTAATAAGAAGCAGATAGAAGGCGAAAGGCTCTATCTCGGGTTGGACTTTGGTACTTCTGGTGCTAGATTTGCCATTATTGACATCGGTGGTGCAATTCAAGCCGAGGCAAAGAGAAAGTATCCGCTATATCCGAATGGAGAGTCATGTGATTGGGCACGCTCATGGAAGGAGACACTTTTTTTGTTGCTTGAAGATATTCCACTTAACCTTCGCAAGCATATTGTATCCATTTCTATTGATGGAACATCTGCAACTACTATAATTGTCGACAGTGACACAGGAGAACCGTTGTGGAGACCTTTACTTTACAATGAAAGTTGTCCTGATGCACTACCTGCTGTAAAATCCATTGCCCCTCCAAACCATACAGTATGCACTGCATCGTCCACTCTGTGTAAGCTCGTCTCATGGTGGAATCGGGATGGTTCAAACCAAAAATCTGCTCTGTTGTTGCACCAAGCAGATTGGCTTTTGTGGCTTCTTCATGGAAAGCTTGGAGTTTCAGATTATAATAATGCTTTGAAGGTTGGATATGATCCTGAAGTGGACTCATATCCATCATGGCTAGTCTGTCAACCATATTCTCATCTTTTACCTTCAGTTGTTGCACCAGGAACTCCAATTGCTTGTTTAAAGGAGGAACTTAGAAATAAATTTGGTTTCCAAAAAGAGTGTGTTGTATGCAGCGGAACAACTGACAGTATAGCTGCATTTCTTGCGGCTCGTGCTACTCAACCTGGAAAAGCTGTCACTTCATTGGGTTCAACACTTGCTATTAAACTATTAAGCAACACAAGAATTGAAGATTCTCGGTTTGGGGTGTACAGTCATCGCCTTGATGATAAATGGCTTGTTGGCGGTGCTTCAAACACTGGCGGTGTTGTTCTTAGACAGCTATTCACCGATGATCAATTAGAGAAACTGAGTGAACAAATCAATCCCTCACAAATATCTCTTTTGGACTACTATCCTCTGCCAAAAGTTGGTGAAAGATTTCCGATCGCAGATCCAGAGTTGGCTCCAAGGCTACTTCCACGTCCAGAAAATGATGTTGAATACTTGCATGGGATTTTGGAATCCATTGCACGTATAGAGGCAAAGGGATATGGGTTGCTAAAGGAGCTAGGTGCAACTGAGGTCGATCAAGTATTCACAGCCGGTGGAGGAGCGAAAAATGAGAAGTGGACAAAGATACGCGAGAGGATGCTGGGGTTACCTGTGAGTCGTGCAGATCAAACAGAAGCTGCATATGGAACTGCATTGTTGGCAAAAAAGGGCGATCAACAAAATATTTTGTGA 1440 0.4236 MLGAISVTHPASTLLSSWTYSQTFGNRLLLSGNKPRTVSMSLSNRNSNKKQIEGERLYLGLDFGTSGARFAIIDIGGAIQAEAKRKYPLYPNGESCDWARSWKETLFLLLEDIPLNLRKHIVSISIDGTSATTIIVDSDTGEPLWRPLLYNESCPDALPAVKSIAPPNHTVCTASSTLCKLVSWWNRDGSNQKSALLLHQADWLLWLLHGKLGVSDYNNALKVGYDPEVDSYPSWLVCQPYSHLLPSVVAPGTPIACLKEELRNKFGFQKECVVCSGTTDSIAAFLAARATQPGKAVTSLGSTLAIKLLSNTRIEDSRFGVYSHRLDDKWLVGGASNTGGVVLRQLFTDDQLEKLSEQINPSQISLLDYYPLPKVGERFPIADPELAPRLLPRPENDVEYLHGILESIARIEAKGYGLLKELGATEVDQVFTAGGGAKNEKWTKIRERMLGLPVSRADQTEAAYGTALLAKKGDQQNIL 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02731 479 Pfam FGGY family of carbohydrate kinases, C-terminal domain 330 470 IPR018485 GO:0005975|GO:0016301
Trre7g02731 479 SUPERFAMILY Actin-like ATPase domain 57 285 IPR043129 -
Trre7g02731 479 Gene3D - 284 476 - -
Trre7g02731 479 Pfam FGGY family of carbohydrate kinases, N-terminal domain 57 286 IPR018484 GO:0005975|GO:0016301
Trre7g02731 479 FunFam D-ribulose kinase isoform X1 284 477 - -
Trre7g02731 479 SUPERFAMILY Actin-like ATPase domain 292 471 IPR043129 -
Trre7g02731 479 PANTHER SUGAR KINASE 57 473 - -
Trre7g02731 479 PIRSF GlpK 55 477 IPR000577 GO:0005975|GO:0016301
Trre7g02731 479 Gene3D - 53 283 - -
Trre7g02731 479 FunFam D-ribulose kinase 54 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02731 Trre-Chr7 23552275 23557721 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02731 K22935 - gmx:100779892 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02731 7 23552275 23557721 Trre7g02731 7 23552275 23557721 ECH