Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02728 ATGACGGCAACAATATCTTCCTCCTCCTGTCACCTCCTCCTCGTTCTCCGTTCACAACCGCCGTTACCGTCACCGTCTTCTTCCTCTTTTATTTCTTTTTTTAAACCTTTATTTCTTCCTTCTTCCAATATTACCCTTCGTAAATTTCACCTTCTTCCAAAAAATACCCTTTTCCCCACTTTCTTATCCACACCTCCATCCTCTTCCCGCGCTTTTTCCTACACCCCTCCCCTCTCTTCTTTCATTGGAAGTTCAACTTCAAAATCCACAGAAGAAAACACATTGGAAGAAGAAGAAGATGATGAAGAAACAGATTTTTCAGAAGATGAATTTGAGACTGAAAAGGACAATTTTGAAGATTCCCAAGTGGTTGTTGAGGATTCGAATTCATCGCCATTGGTGAGACAGAGACAAGAGAGATTGAAGGTGGAATTACCGAGTTTAAGTGTGAAGGAAAAGAAAGAACTTGGGTCTTATGCACATAGTTTGGGTAAAAAGCTTAAGACACAGTCGGTGGGTAAATCTGGTATTACTCCAAATCTTGTTACCGCTTTCAGTGATAACCTTGAAGCTAATGAACTTCTCAAGATTAAAATTCATGGGAGTTGTCCAAGTGAGTTAGATGATGTTGTGAAGCAGTTGGAAGAAGCAACCAGTTCAGTGACCGTTGGTCAGATTGGCCGAACCCTTATTTTATACAGGCCTAGTCTCTCCAAATTGAAGGTAGAAGAAAAGAAGAAACAAAATCAGAAACTTTATCTGGAAAAACAACGTAAACGAAGATTGCTAATAAACAGGAGTAAGGAACGAGAAGCACCCAAATCATCCTGGCGAGGTTCGTCGTGGAAAGTAAGAGGCAGTAGGTCATAA 870 0.4057 MTATISSSSCHLLLVLRSQPPLPSPSSSSFISFFKPLFLPSSNITLRKFHLLPKNTLFPTFLSTPPSSSRAFSYTPPLSSFIGSSTSKSTEENTLEEEEDDEETDFSEDEFETEKDNFEDSQVVVEDSNSSPLVRQRQERLKVELPSLSVKEKKELGSYAHSLGKKLKTQSVGKSGITPNLVTAFSDNLEANELLKIKIHGSCPSELDDVVKQLEEATSSVTVGQIGRTLILYRPSLSKLKVEEKKKQNQKLYLEKQRKRRLLINRSKEREAPKSSWRGSSWKVRGSRS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02728 289 Pfam CRS1 / YhbY (CRM) domain 149 234 IPR001890 GO:0003723
Trre7g02728 289 MobiDBLite consensus disorder prediction 83 131 - -
Trre7g02728 289 FunFam RNA-binding CRS1 / YhbY (CRM) domain protein 147 246 - -
Trre7g02728 289 ProSiteProfiles CRM domain profile. 146 245 IPR001890 GO:0003723
Trre7g02728 289 MobiDBLite consensus disorder prediction 264 289 - -
Trre7g02728 289 Gene3D - 147 248 IPR035920 -
Trre7g02728 289 Coils Coil 242 262 - -
Trre7g02728 289 SMART CRS1_YhbY_2 148 234 IPR001890 GO:0003723
Trre7g02728 289 MobiDBLite consensus disorder prediction 93 116 - -
Trre7g02728 289 PANTHER CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSED 1 283 - -
Trre7g02728 289 SUPERFAMILY YhbY-like 148 236 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02728 Trre-Chr7 23495014 23497285 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02728 K07574 - gmx:100779359 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02728 7 23495014 23497285 Trre7g02728 7 23495014 23497285 ECH