Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02725 ATGACACTCAAACTCTCACTACACTTTCATCACACCTCTCCCCTCAAAACCCTCAACCTCACATCATCACCTTCTCACTTACCTATCCGCTGTTTCCACGCGACTAATTCCTTTCTCGACAACACTTTTACTATTTCTTCAAACTTAGTCCTTGCGGCGTCAAAACATCGTCCTATTGGGATTTTAACTGCTTGTATTGTTGGAAGTAATGAGCAAAATGGCGAATCCGAAGATGAAGACTGTTGTGAAGAAATGGGCGAGAAAAAAGAACTAGTTGAGCAGAGTGTGTGGAATCAGATGAAGGAAATTGTGAAGTTTACTGGACCAGCTATCGGGTTATGGTTATGTGATCCGCTCATGAGTCTCATCGATACCGCAGTTGTTGGTCAGGGAAGTTCAACTGAGCTTGCTGCTTTAGGTCCTGCTACAGTTGTTTGTGATTACATGACCTTAACTTTCATGTTTCTGTCGGTTGTTACATCCAATATAATTGCTACTGCCCTTGCTAAACAGAATAGAGAGGATGTGCAGCATCACTTGTCTATCCTGCTTTTTATCGGGTTGGCATGCGGTTTAGTGATGCTTTTGTCTACAAAGTTATTCGGTGCAGCAACACTTTCCGCTTTTACTGGGCCAAAGAATGCACATGTAGTACCTGCAGCTAATACTTATGTGCAGATTCGAGCCTTGTCGTGGCCTGCTTTACTTGTTGGATGGGTTGCTCAGAGTGCAAGGGGCAGCATGGGCTACAATGGCATCACAAGTTGTTGCTTCATATATGATGATTCGAACCCTAAACAAGAGGGGATACAATGCATATGCCTTCTCCGTTCCTTCAATGAAGGAATTTTTAACAATACTTGGTCTTGCAGCTCCTGTGGCTTTCTTTTCTCTACTTATATACATTGCTACATCAATGGGTACATAAACAATGGCCGCTCATCAAGTCATGATTCAAATCTATATGGCGTGTACGAGTTTGGCAAAGGCCCGATTGCTACTAAGGTCACTTGTGATTATTGGAGCTATACTTGGATTGTTGTTAGGGATATTGGAACATCTCTTCTTTGGTTATTCCCATACATATTTACATCCGATCAAATGGTCATCCAGAAGATGCATAGGACACTGATTCCGTTCTTTGTTGCACTAGGTGTGACACCCTCTACTCGCAGCCTGGAGGGAACTTTGCTGGCAGGACAGGATCTAAGTTTTTTCAGCTTGTCAACATGTGGATGCTTTTGTCTGGCGGCTCTATTATTATTGATCTTTAGTAGATATGGTTTGCAAGGATGTTGGTTTACCCTAGCTGGATTTCAGTGTGCTCGGTTTTCTGTGGCTCTTTTGCGCCTTGTTTCTCCTAACGGCATTTTATACTCGGGAGAGGCAAGTATAAACCAAAAGTTGAGGACTGCCTAG 1419 0.4299 MTLKLSLHFHHTSPLKTLNLTSSPSHLPIRCFHATNSFLDNTFTISSNLVLAASKHRPIGILTACIVGSNEQNGESEDEDCCEEMGEKKELVEQSVWNQMKEIVKFTGPAIGLWLCDPLMSLIDTAVVGQGSSTELAALGPATVVCDYMTLTFMFLSVVTSNIIATALAKQNREDVQHHLSILLFIGLACGLVMLLSTKLFGAATLSAFTGPKNAHVVPAANTYVQIRALSWPALLVGWVAQSARGSMGYNGITSCCFIYDDSNPKQEGIQCICLLRSFNEGIFNNTWSCSSCGFLFSTYIHCYINGYINNGRSSSHDSNLYGVYEFGKGPIATKVTCDYWSYTWIVVRDIGTSLLWLFPYIFTSDQMVIQKMHRTLIPFFVALGVTPSTRSLEGTLLAGQDLSFFSLSTCGCFCLAALLLLIFSRYGLQGCWFTLAGFQCARFSVALLRLVSPNGILYSGEASINQKLRTA 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02725 472 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 356 456 IPR044644 -
Trre7g02725 472 Pfam MatE 114 244 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02725 Trre-Chr7 23401467 23406719 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02725 K03327 - mtr:11443583 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02725 7 23401467 23406719 Trre7g02725 7 23401467 23406719 ECH