Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02723 ATGGCGCACAAATTCTCACCACATTTGAATCACACTTCTCTCCTCGAAAACCCCAACCTCATTTCACATTCAAACCGCCATTTACCTCTTCACTTCCTTCCACCTTCCCTTCTCAACAACAACGCAACTATCCATTCAACAAACCAATGCATTACATCATCCAAGCACCGTCGATTCAGGTTCCTAACAGCACGCGTAGCTCAAAACCACGAATTCATAGATCAATTCGAAGAAAAAGACAAAATCAGTGAGGGTTTTGAAGAAGAAAAAGTAGTCAAGGAATTGGTTGAGCAGAGTATATGGATTCAGATGAAGGAAATTGTCTTGTTTACTGGACCTGCAATTGGACTTTGGTTATGTGGACCGTTGATGAGTCTAATCGATACCGCAGTTGTTGGTCAGGGAAGTTCAATTGAACTAGCTGCTTTAGGTCCTGCTACTGTTTTTTGTGATTATTTGAGCTTCTTGTTCATGTTTTTGTCGATTGCTACTTCAAATATGGTTGCTACTGCACTTGCTAAACAGGATAGGGAGGAAGTGCAACATCACATATCTGTCTTGCTTTTTATTGGGTTAATGTGTGGCATGGTGATGCTTTTGTTCACAAGGTTATTTGGAGCAACAACTCTTGCAGCTTTTACTGGACCGAAGAATGTACATTTAGTACCTGCAGCTAATACATATCTCCAGATTCGAGGGTTGGCATGGCCTTGTTTACTTGTTGGATCAGTTGCTCAAAGTGCAAGTCTTGGTATGAAAGATTCTTGGGGACCTTTGAAGGCTTTGGCTGCTGCCAGTATTATAAATGGAACCGGTGATATAATTCTGTGCAACTATTTAGGCTATGGGATTGCTGGGGCCGCATGGGCTACATTGGCATCACAAGTTGCTGCTGCATATATGATGAGCCAAACTCTAATCGAGAAGGGATACGATGCATTTGCTTTCTCCATTCCTTCATGGAAGGAATTTATGTCAATACTTAGTCTTTCTGCTCCCGTATTTGTGACATTGACGTTAAAGGTGGCTTTCTACTCTCTACTTATATATTTTGCTACATCAATGAGTACACACAAAATGGCCGCTCACCAAGTTATACTTCAGATCTACAATTTATGCACAATATGTGGTGAACCTCTCTCCCAAACTGCTCAATCATTTATGCCTGAGTTTTTCTATGGAGTGAATAGGAGTTTGGCAAAGGCTCGGTCGCTTCTAAGGTCTCTTTTAACTATTGGAGCTGTACTTGGGCTGCTTTTTGGTACTGTTGGAACATTTGTTCCTTGGTTATTCCCCTACATGTTTACACCTGATCAGATGGTCATCAAGGAGATGCATAGGATCTTGGTTCCGTACTTTTTAGCGCTAGTGGTGACACCTGCAACTGTCAGCCTGGAGGGAACATTGCTGGCTGGACGTGATCTAAGATTTTTAAGTTTGTCAATGAGTGGATGCTTTTGTTTGAATGGTCTAGTATTATTGATCCTATCTAGTAAATATGGTTTGCAAGGCTGTTGGTTTGCCCTTGCTGGATTTCAATGGGCTCGGTTTTCAATGGCCCTTCTGCGCCTTCTATCTCCCAATGGCATTTTATACTCGGAAGATATAAGCCAGAATGAGCTGCAAAGTTTGAAGACTGCATAG 1644 0.4179 MAHKFSPHLNHTSLLENPNLISHSNRHLPLHFLPPSLLNNNATIHSTNQCITSSKHRRFRFLTARVAQNHEFIDQFEEKDKISEGFEEEKVVKELVEQSIWIQMKEIVLFTGPAIGLWLCGPLMSLIDTAVVGQGSSIELAALGPATVFCDYLSFLFMFLSIATSNMVATALAKQDREEVQHHISVLLFIGLMCGMVMLLFTRLFGATTLAAFTGPKNVHLVPAANTYLQIRGLAWPCLLVGSVAQSASLGMKDSWGPLKALAAASIINGTGDIILCNYLGYGIAGAAWATLASQVAAAYMMSQTLIEKGYDAFAFSIPSWKEFMSILSLSAPVFVTLTLKVAFYSLLIYFATSMSTHKMAAHQVILQIYNLCTICGEPLSQTAQSFMPEFFYGVNRSLAKARSLLRSLLTIGAVLGLLFGTVGTFVPWLFPYMFTPDQMVIKEMHRILVPYFLALVVTPATVSLEGTLLAGRDLRFLSLSMSGCFCLNGLVLLILSSKYGLQGCWFALAGFQWARFSMALLRLLSPNGILYSEDISQNELQSLKTA 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02723 547 CDD MATE_DinF_like 103 526 IPR044644 -
Trre7g02723 547 NCBIfam MATE family efflux transporter 113 506 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Trre7g02723 547 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 74 529 IPR044644 -
Trre7g02723 547 Pfam MatE 119 269 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02723 Trre-Chr7 23394527 23399985 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02723 K03327 - gmx:100778295 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02723 7 23394527 23399985 Trre7g02723 7 23394527 23399985 ECH