Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02710 ATGCATGCCGCGTTTATGAATGGTCGATTTCTCCTGATTTGTGAGTATTCCAAGGACTTGCCTACATATCTCAAATATTGTAAGGATGTTGTGTTTGCTGGATTGGAACCGTCTTATGGGACTCATGAAGAACAAAATATGATGGAAAATCTATGGAAACATTATCACAATGAAGAGAATACTAAACCATCAAAACCAGGAAAGCAACATGGTACCTCTTTTAACCGACGGCTTCCGACAAACTCTCATGATGATAACTCCTCTGAGAATTTGTCAGATGCCATCGGAAAATTGAAATTGGATATGGAGGAAAATAGATTTTGTTACATAGTACCTACTGTCAAGCAGAAACAAGTGGATTATGTTCACTATGTAAGAAAGAAGGATAATGGTAGTCTATCTTATGTTGCTCATGCTGATTATTACATTTTGCTTCAAGCTTTTGCTAGAGTTGCATATGATGACGACATTCGGATTTTGCATATTGGTGTTTTGAACCTTGAAAGAAGACTTGCTTGGGCCACTGAAAATGGATCAGTTGATGGATCTTAA 552 0.3732 MHAAFMNGRFLLICEYSKDLPTYLKYCKDVVFAGLEPSYGTHEEQNMMENLWKHYHNEENTKPSKPGKQHGTSFNRRLPTNSHDDNSSENLSDAIGKLKLDMEENRFCYIVPTVKQKQVDYVHYVRKKDNGSLSYVAHADYYILLQAFARVAYDDDIRILHIGVLNLERRLAWATENGSVDGS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02710 183 PANTHER TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B 15 177 IPR033599 GO:0001164|GO:0001188|GO:0006360|GO:0070860
Trre7g02710 183 MobiDBLite consensus disorder prediction 66 90 - -
Trre7g02710 183 MobiDBLite consensus disorder prediction 57 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02710 Trre-Chr7 23208413 23209664 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02710 - - tpra:123917577 302.753