Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02677 ATGTCACCGTCATCATCCTCCACCGCCGGAAACTGCAGCAAAATCCGCCGCATTGTTCGTCTCCGACAAATGCTTCTCCGATGGAGAAAGAAAGCACGAATAACAACAACAGGTTACGATGTACCGGAAGGACACGTGGCAGTATGTGTGGGTCCCAGTATGAGAAGATTCGTTGTTCGTGCTAGTTACTTGAATCATCCGATCTTCAAGAAGCTTCTGATGCAAGCGGAGGAAGAATACGGTTTTTGTAACCATGGACCGCTTGCGATTCCTTGTGATGAGTCTTTGTTTGAAGAGGTTCTTCGGGTTATGGCCCGACCCGAACCGAGATTTTCTACGCTTGAAGATTTTCAGAGACGGTGCCACGTGGATGCTAGAAGTAGTAGTAGTAATAGTGGCTTTGATCAGTTTGTAGGAGAATCGAGGCCGTTGCTTCATGATGACCCGATTTGTTGA 456 0.4737 MSPSSSSTAGNCSKIRRIVRLRQMLLRWRKKARITTTGYDVPEGHVAVCVGPSMRRFVVRASYLNHPIFKKLLMQAEEEYGFCNHGPLAIPCDESLFEEVLRVMARPEPRFSTLEDFQRRCHVDARSSSSNSGFDQFVGESRPLLHDDPIC 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02677 151 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 101 IPR003676 GO:0009733
Trre7g02677 151 Pfam Auxin responsive protein 20 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02677 Trre-Chr7 22772791 22773246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02677 10 145 Calmodulin-binding Proteins AT4G34750 51.007 1.61e-43 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02677 K14488 - gmx:100795345 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02677 7 22772791 22773246 Trre7g02677 7 22772791 22773246 ECH