Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02659 ATGGCCAAACAACCACACTCTCAAGATAATCATGGTTTTTCTTTCTACAACAATTATTTTTGCTCAAGTGGACTCGCCGAGTTACAACAACCTCGAATTCCACAATACCATGAACAACAATCACAATATCAACAACAATTACCACAAAATCAACAGTTGTGGCAAGGACATGTTGTTCCCATTATTGATCCCCATGTTTATGATTCAAACATCTTCAATTTCCCTACACTTGTTGCTCTATTTGAGAAACAATGGCAGGAGACAAACCAATTCATCAATATACAGAATGAGCAAATGAAATTCATTTTACAACATCAAAGGGAGCTACAAGTAGCTGCATTTAGAAACATGGAAATTTGCTTACACCGCATTATTAAAAGAAAGGATGAAGAAATTGCAATAGCTATAAAGAAAAAACAAGAGATGGAAAAACTCTTAAGAAGACAAGAGGCGGAGAAAAAGGAATTGAAGAGAATAGCTGAGAAAAGGGGAGTGATGGTAATAGCTTTGCATACCAAATTGAAAGAGGAGAAAAAGAGAGCACGAATGTTACTAGAAAACGATGTAGAATCATGTTGCGATAAAAATGAAGAAGCAAGAGCTGAAAAACGCATAAAACAAGAAAATGATATGATGTTTTGTCCAAAGTGTAACGAAAACTCTCCGAGTGTGTTATTTTTGCCATGCAGGCATATATGTTCATGTCAACCGTGTGAAGCTTTACTCGAAGATTGTCCAATATGTGGAATGACAAAGAAGGGTGTTATTGAAATTCAGAATTTCATTTAA 789 0.3536 MAKQPHSQDNHGFSFYNNYFCSSGLAELQQPRIPQYHEQQSQYQQQLPQNQQLWQGHVVPIIDPHVYDSNIFNFPTLVALFEKQWQETNQFINIQNEQMKFILQHQRELQVAAFRNMEICLHRIIKRKDEEIAIAIKKKQEMEKLLRRQEAEKKELKRIAEKRGVMVIALHTKLKEEKKRARMLLENDVESCCDKNEEARAEKRIKQENDMMFCPKCNENSPSVLFLPCRHICSCQPCEALLEDCPICGMTKKGVIEIQNFI 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02659 262 Coils Coil 125 162 - -
Trre7g02659 262 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 197 259 IPR013083 -
Trre7g02659 262 Pfam Zinc finger, C3HC4 type (RING finger) 213 251 - -
Trre7g02659 262 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 77 258 IPR017066 -
Trre7g02659 262 Coils Coil 182 202 - -
Trre7g02659 262 ProSiteProfiles Zinc finger RING-type profile. 214 248 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02659 Trre-Chr7 22340670 22341956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02659 140 248 Miscellaneous Gene Families AT4G39050 24.545 9.24e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02659 K19042 - tpra:123881413 255.373