Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02622 ATGGCGATGGCTTTCAAAATGGCTACTACTGGGATGTGGGTAACAGATGAGTGCAAGAACTCATTCATGGAGATGAAGTGGAAAAAGGTACATAGATACATAGTTTTCAAGATCGATGAAAGGTCAAGGCTTGTAACCGTTGATAAGGTTGGTGGTCCTGGTGAAAACTATGGTGATCTTGCTGCTTCTTTACCTAAAGATGATTGTAGATATGCTGTCTTTGATTTTGATTTTGTTACTGTTGATAATTGCCGCAAGAGCAAGATCTTCTTCATTGCATGGTCACCAGCAGCATCAAGGATAAGGGCAAAGATTCTATACGCAACATCTAAGGATGGATTGAGAAGAGCTTTGGATGGAATCTCTTATGAACTTCAAGCAACTGATCCAACTGAGATGGGATTTGATGTAATTCAAGACAGAGCAAAATAG 432 0.3981 MAMAFKMATTGMWVTDECKNSFMEMKWKKVHRYIVFKIDERSRLVTVDKVGGPGENYGDLAASLPKDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPAASRIRAKILYATSKDGLRRALDGISYELQATDPTEMGFDVIQDRAK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02622 143 ProSiteProfiles ADF-H domain profile. 11 143 IPR002108 GO:0003779
Trre7g02622 143 SMART adf_2 16 143 IPR002108 GO:0003779
Trre7g02622 143 FunFam Actin-depolymerizing factor 2 5 143 - -
Trre7g02622 143 CDD ADF_cofilin_like 10 142 IPR017904 GO:0015629|GO:0030042
Trre7g02622 143 Gene3D Severin 2 143 IPR029006 -
Trre7g02622 143 PANTHER COFILIN-RELATED 8 142 IPR017904 GO:0015629|GO:0030042
Trre7g02622 143 Pfam Cofilin/tropomyosin-type actin-binding protein 18 140 IPR002108 GO:0003779
Trre7g02622 143 SUPERFAMILY Actin depolymerizing proteins 6 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02622 Trre-Chr7 21695375 21696228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02622 K05765 - gmx:100801857 285.419