Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02619 ATGGATGATCCTAACAACAACAAAGGTAATTCATCTTCTTACGACTCTTCATCTTCTTCTTTATTATCACAACCTTTCTTATCAAAACCCTCAATCCCAACAACAACAACAACAATAGAAGACCATGATTCAAACCAAGATTCTGACACAAATCAACAATACATTCACATCTCATACAATCATGGTCCTCGTTATTTCAAAGACTTACCTTTTCTAATCCTTTTTCTCCTCTTTGTTCTCTCCACTTTCGCTTTTGGAATCTTCTCTATTTTCCATAGAAACACCAATTACTCAACACTTTCTTCTTACACCTATGATACCAACACCACCTCTTGCATCAACAACCCTTCTTCACTTTCATCAACTTTTCCCATCAATTTTCTCTCTTCATCTTCACCTTTTGTTAAAGATTTAACATGGACACTTGTTATCACCTTCATTTTAAGCCTACCCATGTGTTGGTCTTTGCTTCTTTTACTCAAGCATTACACCAAACACCTTGTCTACGCTTCTCTTCCTTTCTTTATTCTTATTCCTATCTTCTTAAATGTTTATTGGTTTGTTGCTTGCACTATTAAAACTTCATGTAGTCATGCTTTTCCTATGGTGTATAGAATTATGGTGTTGGTTTTTGTTTTTTTGGTTATTGGTGTCATTGTGTGGATTCTTGTTTTGAATTGGCATCGTGTGGAACTCACTGTTAGTATAATTGGGGTTGCTTCTGATGCACTTTCTTCCAATATGGGTTTGTTTGGGGTGCTTCCTTGTTTGACTTTTGGGCTTGTTGTGTATTATGTGCCTATTGTGGTTTTTTTGGTGTTTGCTAAGTATAATGGGAAGGTTGTGCCTAAGAAATTGCATAGTCAATATGATTGTGTTTGGAAGGAGGATTCTTGGGTTCCAGCTTATTTTGCATTGGCAATACTTACTATGTTGTGGTCAGCAGCAGCTATGCTTGAAGCTCAGGTTTACGTCATTAGTGGAACTATTGCTCGTTGGTATTTCTCCAAGGATTTTGAGACTCCTACAAAGAGTATTAGAACTTCTCTCAGAAATGCTTTTGGTCCTTCTTCTGGAACAATATGTTTGTCGGGATTGCTTATCTTTGTTGTTCGATTAGTGCGTTCTGTCGTTGATAATGCAAGACAAGAAGGCGCTCCAGGGCTAGTGAACATTGTATTGCGGTGCTGTGTAAATGCCTTACTGACAGCTGTTGATTTTCTTAATAAGTTTACTATCAACTTTGCTGCAATAACTGGTGAAGCTTACTGCACATCTGCAAGGATGACATATGAACTTCTAAGACGTAACCTTCTCTCTGCTGTTTTTGTGGAGACAATATCATCTCGCCTTCTGGTTGGAATTGTTTTTGTCCTGTCAGCAATTTTCACAATTGTGGCCTGTGTTATCTTAAAAGCTGCGACCAATCTTGGGTCTGATGCATATTTTGTGGCAGCAATAGCATGGCTTCTACTGATAATAGTGCTGGGTTTCCTTGTTCATGTGCTCGACATTGTAATTGACACAATTTATGTCTGCTATGCCATAGACAGGGACAGAGGAGAGGTTTGTAAACAAGATGTTCACAAAGTTTACGTTCACCTACCCATAAGTAGAAGTCTTAGACAATCTAATATTACAAGAACTCTAGGTGTATAA 1659 0.3779 MDDPNNNKGNSSSYDSSSSSLLSQPFLSKPSIPTTTTTIEDHDSNQDSDTNQQYIHISYNHGPRYFKDLPFLILFLLFVLSTFAFGIFSIFHRNTNYSTLSSYTYDTNTTSCINNPSSLSSTFPINFLSSSSPFVKDLTWTLVITFILSLPMCWSLLLLLKHYTKHLVYASLPFFILIPIFLNVYWFVACTIKTSCSHAFPMVYRIMVLVFVFLVIGVIVWILVLNWHRVELTVSIIGVASDALSSNMGLFGVLPCLTFGLVVYYVPIVVFLVFAKYNGKVVPKKLHSQYDCVWKEDSWVPAYFALAILTMLWSAAAMLEAQVYVISGTIARWYFSKDFETPTKSIRTSLRNAFGPSSGTICLSGLLIFVVRLVRSVVDNARQEGAPGLVNIVLRCCVNALLTAVDFLNKFTINFAAITGEAYCTSARMTYELLRRNLLSAVFVETISSRLLVGIVFVLSAIFTIVACVILKAATNLGSDAYFVAAIAWLLLIIVLGFLVHVLDIVIDTIYVCYAIDRDRGEVCKQDVHKVYVHLPISRSLRQSNITRTLGV 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02619 552 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 42 517 IPR007603 GO:0022857|GO:0055085
Trre7g02619 552 Pfam Plasma-membrane choline transporter 211 519 IPR007603 GO:0022857|GO:0055085
Trre7g02619 552 MobiDBLite consensus disorder prediction 1 49 - -
Trre7g02619 552 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02619 Trre-Chr7 21644885 21649745 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02619 - - tpra:123913083 952.199