Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02596 ATGGAAATGGCTTCTGATAAAGCTGTGGAAACAGTAATAGTTGGAAATTATGTAGAAATGGAAAGTGAAGGAAAACCACCACAGGACATAAAATCTAAGTTATCAAACTTTTTGTGGCATGGTGGTTCTGCTTATGATGCTTGGTTTAGCTGTGCTTCCAACCAGGTGGCTCAAGTTCTGCTTACTTTACCATACTCATTTTCCCAGCTTGGAATGCTTTCTGGCATACTTTTTCAACTCTTTTATGGTTTACTTGGTAGCTGGACTGCTTACCTCATTAGCATCCTCTATGTTGAATATAGAACAAGAAAAGAGAGAGAAAAAGTTAATTTCAGAAGCCATGTTATTCAGTGGTTTGAGGTTCTTGATGGACTACTAGGGAAGCATTGGAGAAATGTGGGTTTGGGATTTAATTGCACATTTCTTTTGTTTGGATCTGTTATCCAACTTATAGCTTGTGCAAGCAACATATATTACATAAATGATAATCTTGACAAGAGGACTTGGACTTACATTTTCGGAGCTTGTTGTGCCACTACTGTTTTTATTCCTTCATTTCACAACTATAGAATATGGTCCTTTTTGGGTCTTGTTATGACCACTTACACTGCTTGGTATCTTACAATTGCAGCTATACTTCACGGACAGATGGAAGGAGTTAAGCATTCGGGTCCAAATAAAATGGTTTTATATTTTACTGGGGCCACAAACATTCTCTACACATTCGGGGGACATGCCGTTACTGTGGAAATAATGCATGCAATGTGGAAGCCTCAAAAGTTCAAGGCAATATATTTACTGGCTACCCTTTATGTGTTGACACTGACCCTTCCATCAGCAGCAGCAGTTTATTGGGCATTTGGTGACATGCTTCTAAATCACTCCAATGCTTTTGCTCTTCTTCCTAAATCACCCTTCCGTGACATGGCTGTCATTTTAATGCTCATTCATCAGTTTATAACATTTGGATTTGCATGCACCCCATTATACTTTGTATGGGAGAAAGCAATAGGAATGCATGAGTGCAAAAGTTTGTGCAAGCGTGCATTAGTGAGATTACCAGTTGTTATTCCAATTTGGTTTTTGGCTATTATATTCCCTTTCTTTGGACCCATCAATTCCACCGTTGGATCTCTCCTTGTTAGTTTCACTGTTTACATCATCCCTGCCCTTGCTCACATCTTCACCTTTAAATCTTCCTCTTCTCGACAGAATGCTGTGGAACAACCTCCCAAGTTTGTTGGAAGATGGGTGGGAACATTTGTGATCAATGTATTTATAGTTGTGTGGGTCCTAATTGTGGGCTTTGGATTTGGAGGGTGGGCCAGTATGGTGAATTTTGTGCATCAAATTGATACATTTGGACTTTTCACAAAATGTTACCAATGTCCTCCACCAACACCATCTCTTCCAATTATGCCACCTCACCAGTTTAACGCAACCGCGCCGGCGCCGTCGCCTCACCACCAACACCACCACTGA 1482 0.4042 MEMASDKAVETVIVGNYVEMESEGKPPQDIKSKLSNFLWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSWTAYLISILYVEYRTRKEREKVNFRSHVIQWFEVLDGLLGKHWRNVGLGFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLVMTTYTAWYLTIAAILHGQMEGVKHSGPNKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVLTLTLPSAAAVYWAFGDMLLNHSNAFALLPKSPFRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRALVRLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSSSSRQNAVEQPPKFVGRWVGTFVINVFIVVWVLIVGFGFGGWASMVNFVHQIDTFGLFTKCYQCPPPTPSLPIMPPHQFNATAPAPSPHHQHHH 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02596 493 Pfam Transmembrane amino acid transporter protein 40 433 IPR013057 -
Trre7g02596 493 PANTHER OS05G0424000 PROTEIN-RELATED 46 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02596 Trre-Chr7 21414444 21419102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02596 6 493 Organic Solute Cotransporters AT2G21050 86.475 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02596 K13946 - gmx:100799180 924.85