Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02577 ATGAATATTGTCCTTGTGGTTGGTGTCATCCTCATCCTGCTCGCAGGTTTTGAAGCTGAAGCATTATCTTATGATTACAGTGTCAGCATTGAATGTTTGGCAACTCCACATAAGCCTCAATACAATGGAGGAATAATTCAAAACCCAGAATTTAATGATGGATTACAAGGGTGGAAACAATTTGGAGAAGCCAAAATTGAACTTAGAGAATCATTAGGTAACAAATATGTGGTAGCTTATAGCAGAAGTCAATCATATGATAGTGTCTCCCAAAAGATTTCCCTCAAAAAGGGGATGTATTATACTTTATCCGCTTGGATACAAGTGAGCGAGGGAAACATTCCTGTAGCTGTAGTTGTGAAAACAAGTAAGGAATTTAAATATGGTGGTACCATTTATGCTGAGTCTAAATGTTGGTCTATGCTTAAGGGTGGTTTCATTTCAGATACATCAGAAGAAGCTGACCTCTATTTTGAGAGTAGTAATACTGCTGTGGAAATTTGGATAGACAGCGTTGCCTTACAGCCGTTCACAGAAAAGCAATGGGAGTCTCATCAATATCAAAGTATTGAAAAGGCACGCAAGAGTAAGATATTAGTCCAAGCAATTGATAAACAAGGGCACCCTTTACCAAATGCAAGTTCACAGTTACAGCATTTGAAAATGAAATGGTACACAAATGAATATGCACATGGAAAAGAGAACTATTTCCAAGCTGATCAAATGCTAAGTTATGCAAAATCACACAATATTTATGTTAGAGGACACAATATATTTTGGGAAGATCCTAAATATCAACCAAATTGGGTTACTTCACTTTCACCAAATCAACTAAACAATGCAGTTCAAAAGAGAGTGAATGCCATTGTGCAAAGATATAAGGGACAAGTTATTGGTTGGGATGTTATTAATGAAAATCTTCGCTTCTCATTTTTTGAAAGTAAACTTGGACAAAATTTTTCAGCTAAAATATTTAATGAAGTTCATGATATTGATGCAAAAGCCACTTTGTTTTTGAATGAGTTTAACACAATTGAGGATAGTAGAGATGTGTTGTGA 1059 0.3551 MNIVLVVGVILILLAGFEAEALSYDYSVSIECLATPHKPQYNGGIIQNPEFNDGLQGWKQFGEAKIELRESLGNKYVVAYSRSQSYDSVSQKISLKKGMYYTLSAWIQVSEGNIPVAVVVKTSKEFKYGGTIYAESKCWSMLKGGFISDTSEEADLYFESSNTAVEIWIDSVALQPFTEKQWESHQYQSIEKARKSKILVQAIDKQGHPLPNASSQLQHLKMKWYTNEYAHGKENYFQADQMLSYAKSHNIYVRGHNIFWEDPKYQPNWVTSLSPNQLNNAVQKRVNAIVQRYKGQVIGWDVINENLRFSFFESKLGQNFSAKIFNEVHDIDAKATLFLNEFNTIEDSRDVL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02577 352 PANTHER GLYCOSYL HYDROLASE 221 348 IPR044846 GO:0004553|GO:0005975
Trre7g02577 352 SUPERFAMILY (Trans)glycosidases 222 347 IPR017853 -
Trre7g02577 352 Pfam Glycosyl hydrolase family 10 221 347 IPR001000 GO:0004553|GO:0005975
Trre7g02577 352 SUPERFAMILY Galactose-binding domain-like 42 175 IPR008979 -
Trre7g02577 352 Gene3D Glycosidases 213 351 - -
Trre7g02577 352 Gene3D - 33 178 - -
Trre7g02577 352 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 184 352 IPR001000 GO:0004553|GO:0005975
Trre7g02577 352 Pfam Carbohydrate binding domain 44 161 IPR003305 GO:0016798
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02577 Trre-Chr7 21205858 21210359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02577 18 351 Glycoside Hydrolase AT4G33840 50.136 5.06e-135 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02577 - - gmx:100775272 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02577 7 21205858 21210359 Trre7g02577 7 21205858 21210359 ECH