Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02562 ATGAACGAGAAAGGTCAAGAACAACTACAAAACTGGATAAAGGGAGACGAAAGCGGCGGCGATATGCTGAAACGAGTATGGAGAGTACGACCTTTCCTCCTCCCTCCGCCGCTTCACAGAGTTCCTCTCCGTGTCGGTAACGTCCTCGAACTCGTCGGTCCTTCTCCTTCCGCCAAAACTCAAATTCTAATTCAAACTGCAATCGCTTGCATTCTTCCAAAACATTGGAATGGAATACACTATGGTGGTTTTGATCATTTGGTACTCTTTATTGACCTTGATTCTCGCTTTGATATCAATCGTTTCTCTCAATTGCTCATTTATCGCATTATTGAACCTTATGGAGAAGGTAGTAGAGATTATGATAAAGCGTTGTATGATTTGTGTATGTCTCGGTTTTTGTATGTTCGTTGTTCTGACAGTTTTCAGTTTCTTCAGACTCTCAAGACATTACGTCGGCGCTTGGATAAGGAGAAAGAAGTTCATGGTGTTAGTGTTCACTTGCTAATGATTGACAGCATTGGAGCTTTTCATTGGATGGATCGTGCATCTATGTTCTTGTCTCTGAAAGAGAACAGCAGGAAAAAACTTTTTCTTCAAAGTGTGTCAGAAGCTGTAGTTCAGGATATTAAAAAACTTCTTCAGGTGCATCCAATGCTTGTTATAGCTACAAAGTCAGTGATTTTTTGGGATAAACGTTCCACAGCTTCAGTTGAGGTCAAAGGAAGTTTCATGAAAAATAATTGGGAAGAAAGAAGTTCGAGAAATGTAACAAGAAACAATCAACATTTTCAGTATCGTGAGTACATGCCTTCTATCTGGCAGTCCTTTGTTACACACAGAATACTTATACGTTCTTCAGATGATCATTCTGTTACAAACAAGTGCCAGAACTCCTCATTCTATTTGTTGGAATGGTTATTGCCAAGATTGAGTTTTTCAGACAAGATTGTAGTGAAAGATGCTGGAGTTTTTGTCGATTCTTAA 987 0.3941 MNEKGQEQLQNWIKGDESGGDMLKRVWRVRPFLLPPPLHRVPLRVGNVLELVGPSPSAKTQILIQTAIACILPKHWNGIHYGGFDHLVLFIDLDSRFDINRFSQLLIYRIIEPYGEGSRDYDKALYDLCMSRFLYVRCSDSFQFLQTLKTLRRRLDKEKEVHGVSVHLLMIDSIGAFHWMDRASMFLSLKENSRKKLFLQSVSEAVVQDIKKLLQVHPMLVIATKSVIFWDKRSTASVEVKGSFMKNNWEERSSRNVTRNNQHFQYREYMPSIWQSFVTHRILIRSSDDHSVTNKCQNSSFYLLEWLLPRLSFSDKIVVKDAGVFVDS 328
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02562 328 PANTHER DNA REPAIR PROTEIN XRCC2 10 326 IPR030547 GO:0000724|GO:0005657|GO:0006281|GO:0033063
Trre7g02562 328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 191 IPR027417 -
Trre7g02562 328 Pfam Rad51 44 227 IPR013632 -
Trre7g02562 328 CDD XRCC2 46 285 - -
Trre7g02562 328 Gene3D - 40 303 IPR027417 -
Trre7g02562 328 ProSiteProfiles RecA family profile 1. 23 328 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre7g02562 Trre-Chr7 21067131 21072397 Dispersed/Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02562 K10879 - gmx:100807727 452.21