Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02553 ATGTCGGATCTTGAGGCTCCCCTGCGCCCAAAGAGGAAGAAGGTTTGGGTTGACTATTTTGTTCAGTTTCGATGGATCCTTGTTATTTTTGTGGTTCTTCCCATTTCCTTCACACTTTATTTCCTAACATACCTTGGGGATGTGAGATCTGAATGGAAGTCCTTCAAGACCCGACAGAAGGAACACGATGAGAATGTCCAGAAGGTCGTCAAACGTCTCAAACAGAGGAATCCCTCAAAGGATGGTCTTGTCTGCACTGCTCGTAAGCCGTGGGTCGCTGTTGGGATGAGAAATGTTGACTATAAGAGGGCCCGTCATTTTGAGGTTGATCTTTCTGCTTTCAGGAACATACTTGAGATCGACCAAGAGCGAATGATTGCTAGAGTAGAGCCCCTTGTCAACATGGGGCAGATCACCAGGGTCACCGTGCCTATGAATCTTGCACTTGCTGTGGTTGCTGAGCTCGATGATCTTACCGTTGGTGGCCTCATAAATGGTTACGGGATTGAAGGAAGTTCCCATAAATATGGCCTCTTTTCCGATACTGTTGTAGCCTTTGAAATTATTTTGGCAGATGGAACTCTTGTTAAAGCCACCAAGGACAATGAGTACTCTGATCTATATTACGCTATTCCGTGGTCTCAGGGAACACTTGGGCTTCTTGTTGCTGCTGAGGTCAAGCTTATACCCATTAAGGAGTACATGAAGTTAACCTATAAACCAGTTGTTGGTAACCTGAAAGATATTGCACAGGCATATTCTGATTCTTTTTGTCCCAGAGATGGGGACCAGGATAATGATGAGAAGGTTCCCGACTTCGTTGAAACTATGGTTTACTCTCCAACACGAGCTGTGTGCATGACGGGGAGGTATGCTTCGAAAGAAGAGGCCAAAAAGAAGGGGAATAAGATTAACAGTGTAGGGTGGTGGTACAAACCGTGGTTCTACCAACATGCAGAGACAGCACTCAAGAAAGGACTGTTTACAGAATACATTCCCACCAGAGAATATTATCATAGGCACACAAGGTGTTTGTATTGGGAGGGAAAGCTTATTCTCCCATTTGGTGATCAATTTTGGTTTAGGTTTCTGCTTGGATGGTTGATGCCCCCCAAGGTTTCTCTGCTCAAGGCAACTCAAGGTGAAGCTATTAGGAACTATTATCATGAAATGCATGTTATCCAGGATATGCTTGTTCCTTTGTACAAGGTGGGAGATGCACTAGAATGGGTTGACCGTGAAATGGAGATCTACCCTCTGTGGCTCTGCCCACACAGATTGTTCAAGCTGCCAGTCAAAACTATGATTTACCCAGAAGCAGGCTTCGAGTTACAACGCAGGCAGGGAGACACACAGTATGCTCAAATGTTCACAGATGTTGGAGTTTACTATGCACCAGGTCCTGTGTTAAGGGGTGAGGTGTTTGATGGTGCAGAAGCAGTGCGTAAAATGGAGAACTGGATGATTGAAAATCATTGTTTTCAGCCACAATATGCTGTCTCTGAGCTGAATGAGAAAAACTTCTGGAGGATGTTCGATGCTGGTCTGTATGAGCACTGTAGGAGGAAGTATGGAGCTGTTGGGACTTTTATGAGTGTGTACTACAAATCAAAGAAGGGCAGGAAAACTGAGAAGGAGGTGCGCGAAGCTGAGCAAGCACACCTTGAGACTGCATATGCAGAAGTTGATCAACCAGCTGACTGA 1704 0.4519 MSDLEAPLRPKRKKVWVDYFVQFRWILVIFVVLPISFTLYFLTYLGDVRSEWKSFKTRQKEHDENVQKVVKRLKQRNPSKDGLVCTARKPWVAVGMRNVDYKRARHFEVDLSAFRNILEIDQERMIARVEPLVNMGQITRVTVPMNLALAVVAELDDLTVGGLINGYGIEGSSHKYGLFSDTVVAFEIILADGTLVKATKDNEYSDLYYAIPWSQGTLGLLVAAEVKLIPIKEYMKLTYKPVVGNLKDIAQAYSDSFCPRDGDQDNDEKVPDFVETMVYSPTRAVCMTGRYASKEEAKKKGNKINSVGWWYKPWFYQHAETALKKGLFTEYIPTREYYHRHTRCLYWEGKLILPFGDQFWFRFLLGWLMPPKVSLLKATQGEAIRNYYHEMHVIQDMLVPLYKVGDALEWVDREMEIYPLWLCPHRLFKLPVKTMIYPEAGFELQRRQGDTQYAQMFTDVGVYYAPGPVLRGEVFDGAEAVRKMENWMIENHCFQPQYAVSELNEKNFWRMFDAGLYEHCRRKYGAVGTFMSVYYKSKKGRKTEKEVREAEQAHLETAYAEVDQPAD 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02553 567 PANTHER 24-DEHYDROCHOLESTEROL REDUCTASE 1 554 IPR040165 -
Trre7g02553 567 Gene3D - 110 231 IPR016169 -
Trre7g02553 567 ProSiteProfiles PCMH-type FAD-binding domain profile. 45 231 IPR016166 GO:0071949
Trre7g02553 567 FunFam delta(24)-sterol reductase 118 289 - -
Trre7g02553 567 SUPERFAMILY FAD-binding/transporter-associated domain-like 104 231 IPR036318 GO:0050660
Trre7g02553 567 Pfam FAD binding domain 107 198 IPR006094 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02553 Trre-Chr7 20991512 20993979 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02553 K09828 - gmx:100814521 1092.03