Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02540 ATGGCAAAATCTGGAAATTTGGTATCCCAAAGAAGTTTCAGCTCAATATTCAATCCATGCCACACTGCTGCTAAGGTCAAAATCTTCATGTTGCATTCTCAGTTTCACACTAACAATAATTCTAGAGGTAGTGTAACTATCACAGCTTCTACCAAAAGAAAGGACAACTTGCACTCTCCATTGATTGGGAAGAATACGAGTAGGGCTACCCGCCGTTTGATCACAATATCACCAGCTGACGGAAAATATAATGGAGAATGGACAAGTAATCATCATGTATCTTTGAGAGACCTACATTTACAGGATTTGATTGAAGCTGAAGACGATCCACGCAAGAATGCACAAGTAGTCGTCAGTCTCTCCATCCAAAAGCATGCTAGCTTTGGTTTATCGGTAGATGCAAGAATCACCACATCCTTCACTTCAAAATGCAGCAACTGTTCTTCCCCATATTGCAGACAGATTGACGCAAAATTTAACGTATGGGTTCTTAGGGATACAACTAGAGAGAAACGTAAGACGCCGCTACCTGAAATTGGAGATGACCCTTATGTGATATATACCAGACCCGGATTTGAAGTTGAACTTGATTCTATTGTACAAGATGCAATCCGGCTAAACTCTGCAGTAAACGACACGTGCTCGGAGTTGTGCGAGAAATCTGAGGGTACTACTATACAATATACAATTGGACAAAGTCAGGCTTCTTTTGATAAACGATGGTCGAGACTATTGGAACTCAAGAAAGCAATTTTATAA 759 0.4045 MAKSGNLVSQRSFSSIFNPCHTAAKVKIFMLHSQFHTNNNSRGSVTITASTKRKDNLHSPLIGKNTSRATRRLITISPADGKYNGEWTSNHHVSLRDLHLQDLIEAEDDPRKNAQVVVSLSIQKHASFGLSVDARITTSFTSKCSNCSSPYCRQIDAKFNVWVLRDTTREKRKTPLPEIGDDPYVIYTRPGFEVELDSIVQDAIRLNSAVNDTCSELCEKSEGTTIQYTIGQSQASFDKRWSRLLELKKAIL 252
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02540 252 Pfam Large ribosomal RNA subunit accumulation protein YceD 132 248 IPR003772 -
Trre7g02540 252 PANTHER LARGE RIBOSOMAL RNA SUBUNIT ACCUMULATION PROTEIN YCED HOMOLOG 2, CHLOROPLASTIC 1 250 IPR044985 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre7g02540 Trre-Chr7 20887202 20889385 Dispersed/Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02540 - - aprc:113865894 370.933