Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02512 ATGGCGACTCTGCAATTCACATTCACCGATTCAACCACTCTATGCCGACCGTCGTTATCTCAACTACCTTCTAAATCCGCCGTTCATTCTCGAACCCGAAGTTTCGTCGTCAAAGCTTCTCTCGAACTTTCCAGAACGAGAAGACAGTTTATCGCAGAAACCACTGCTATATCGGTACTGCTTCCTTCTCAGTTGGCGAAATCCGAAGAAACTCTTTCCGAATGGGAAAGAGTTTACCTCCCTATCGATCCTGGTGTTGTACTTCTTGATATCGCTTTTGTTCCCGAAGATCCTAACCATGGTTTTCTTCTGGGGACGAGACAAACTCTTTTGGAGACTAAAGATGGAGGAAACACTTGGGCTCCACGTTCTATACCATCCGCAGAAGATGAAGATTTTAACTACAGGTTTAATTCAATCAGCTTCAAAGGGAAAGAAGGATGGATAGTGGGAAAACCTGCAATTCTTTTGTACACTCCTGATGCTGGAGAAAGTTGGGAAAGGATACCACTCAGTGCTGAACTTCCTGGCGATATGGTATACATAAAGGCAACTAATGAGAAGAGTGCGGAGATGGTGACCGATGAAGGTGCAATTTATGTTACCGCAAACAGAGGATACAATTGGAAGGCTGCTGTTCAGGAATCGGTGTCGGCTACTCTTAATAGAACAGTTTCTAGTGGTATCAGTGGTGCCAGCTATTACACTGGAACTTTCAATACTGTCAACCGATCTCCCGATGGAAGGTATGTTGCAGTCTCAAGTCGTGGCAATTTCTACTTGACCTGGGAGCCTGGTCAGGCATACTGGCAGCCACACAACAGAGCAGTTGCTAGAAGAATCCAGAACATGGGATGGAGAGCAGATGGTGGTCTGTGGCTTCTTGTCCGTGGAGGTGGTCTTTATCTCAGCAAGGGCACAGGGATAACTGAAGAATTCGAGGAAATTCCTGTTCAAAGCCGGGGGTTCGGCATTCTTGATGTTGGATATCGTTCAACGGATGAGGCTTGGGCAGCAGGCGGTAGTGGTGTTCTCTTGAGAACTAATAATGGTGGCAAGTCATGGATCCGTGACAAAGCTGCTGACAACATTGCTGCAAATTTATATGCAGTAAAGTTCATTGATGAGAAGAAGGGATTCGTATTGGGAAATGATGGAGTCTTGCTTCGCTACCTTGGATAG 1182 0.4585 MATLQFTFTDSTTLCRPSLSQLPSKSAVHSRTRSFVVKASLELSRTRRQFIAETTAISVLLPSQLAKSEETLSEWERVYLPIDPGVVLLDIAFVPEDPNHGFLLGTRQTLLETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTPDAGESWERIPLSAELPGDMVYIKATNEKSAEMVTDEGAIYVTANRGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAYWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGITEEFEEIPVQSRGFGILDVGYRSTDEAWAAGGSGVLLRTNNGGKSWIRDKAADNIAANLYAVKFIDEKKGFVLGNDGVLLRYLG 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02512 393 SUPERFAMILY Oligoxyloglucan reducing end-specific cellobiohydrolase 74 392 - -
Trre7g02512 393 PIRSF Photosystem_II_Ycf48-like 37 393 IPR016705 -
Trre7g02512 393 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 27 393 - -
Trre7g02512 393 Gene3D - 61 289 IPR015943 GO:0005515
Trre7g02512 393 Pfam Photosynthesis system II assembly factor YCF48 70 391 IPR028203 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02512 Trre-Chr7 20647084 20651678 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02512 - - gmx:100810566 703.745