Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02507 ATGCCTCCCGCGCGTCGACGCGGAGCGAATAAGGCCAACGCGAACGGTGACTTTCGTTTAGGCGATCTCGTTCTTGCTAAGGTTAAAGGCTTCCCTGCTTGGCCTGCAAAGATAAGTAGGCCGGAAGATTGGGAGAAAGCCGCTGATCCTAAGAAATTTTTTGTTCAGTTTTTTGGCACCAAAGAGATAGCTTTTGTTGCACCCCCAGATATTCAGGTATTTACAAGTGAGTATAAAAATAAGTTGACTGCTCGGCTTCAAGGCAAGACGAAGTACTTTACCCAAGCTGTGAAGGAAATATGTGCAGCTTTTGATGAGTTACAGAAACAGAAGAGTAGTGGTGATGACACTGATGATTCTCGGATTGGTTCAGAAGCTCCTCCTGTTGACGAGGCAGTAGGTAATTCAAAGGATACTACTGATGCTATGACGTCTCATACAGAAAAGGATAACATCTATGTGAGTAATGTTGGCTCCAATTTGGAGGGCTGTTTGCTGAAAACCAGAGAGAGGGGTAGCCTAGATGAAAAGCTCACTGAGTCTGGCCATCCAAAGGAAAGTTCTTCTGTTTCATCTCCTTTGGTCAAAAGTAAATTATCGGCTGGTTCAGAGATAAAGAATTCTAGCAAACCTACTCTTAAAGGTGCAAGTAATGTTAATGATTTTGGTCAACATGATAATGGAAATAGTGTATTAACAAATGGGAGTAAGCCACGAAAGCTTGTTACTGGTTCAAAGAGAAAAAGTGAATTTGCAGATGATAGAAACAAAAATGGTGGATCTTCTGGGACACTTATGAAGGTGGGAAATTCTACCGGCAGTGGTGACCTTTCCAGGTCGGGGGAGGCATTTAAAACTGGTAAGAAAGGGAAAGATACATCTGCAGTTAAATCAGGTTCTCCTGACACTCTTAAACCAGACTCAAATGGTAATACTGGAGAGAAAAGTAAGAACTTGATTTCTAGGAAAGCAAATCTTGTGGTAAAAAATGAATTACAGGAGCTCATGTTTGATGCTAAGGAGTCTGATGGCAAAAACTCAAGTATGGGAAAGAAGAACCAAGTTCATGCAAAGCATAATATGGGAGCAAATGAGTCATTACAGGCTACAAAGAAGTTGAAACGCATGGATGCTAGAGATGAGTTACCCTCAGGGCACATCCCAAAAGATGTGAAAAGTGCTTTGCCTTGCTCTACTTCTGTTGAAGATAAATCATCTAAAATGTTAGAGTTGAAACGTTCCACATCAAATTCAAAAGCAGGAAAAAGCTCTGTCCATGAGTTGTTACCTGTGATCAAACAACATAGCCAAGTTCAGAAAACTATGCCTGATTCTGATACTATTGCTTCTGATGAGAAAAAAGAAAGGAATAATCTTAAACTGAAAGGTGATACGAAGAATGTTACGACGAAACAAGTACAGAGAAAACGTAAAGCTGTCTGCCTTCATGAAGACGATGATGTACCTAAAACTCCTGTTCATGGAGGAGCTGCAAAAAATATGAAATCACCTTTTGCTACAGAGGTCAAGAAGGGAAATAATGCACATTCTGAGAAATCTGGTGCTGCTTGCAGAAATTCTAGTCAACTTGAGGATGCTCATTTGAAAGAGCCATCTTCTGAAAAAGCGAAAGCTGATGAAGTCAATCCTGTCCATGTTCCTCATAGTCATCATAAGTTAGATTCAAAGCAGTTTCCTTCTAAGGCGGCAAAAGTAAGCTCTGCCTCCCCAGTAAAATCACCTCAGCCAGTTCCCTCAACAACAAAGTCAAATACTGAGTGGAGTAAATCTTCCAAACCTTTGGTTAAAGCTTCCAGCATTGCTACTCAAAAGAAGGCAGATAACGGGTCTTCAAAATCTTTACTCAACCTCAGCTCTTCTCAGAACCCAGTTTCTGCTCATAAGAAGAAGCTGGCATCTTCAGTTGAAATTTCTAAGACTACTCCAAAGACATTGCCTCAGGCAGTTGACGTTCCTGTTTCAACAGTAGATTTTAAGGAGCCTGATGCACTGCATGTTGATGGATTGGAAGAGGGTATGGTAGAAAGAAGTAATATATACACTGGTTCTGGGAATTCAGAAACATCTAAAAATATGAAGCATCTAATTGCAGCTGCCCAAGCAAAATGGAAAAAAGCTCATTCTCAATATCTCTCTTCTGATATTCATAATGTTCAATGGGGGACTCCTAGCCCCTCCACTGTTCAGCCGTTTTTTTCTGTCTCAAGTAACTTCGCACAGACAGATGTGCAGGGAGTTCATGAGCACACGACTTCGGCTTCTCCACCAACTAATGAATATCACTCTGTATCTCAAAATCAGCTCGATGCTGATGAAATTGAGGAGAGAAGAGTAGGTTCAGTGCAAAGGGGTCCTGGTGGATCGCTCAGTGGTGATACAGAGGCCGCTGTTGCCCGTGACGCTTTTGAAGGAATGATTGAAACTTTGTCAAGGACCAAGGAAAGTATTGGGCGCGCAACTCGTCTTGCCATAGATTGTGCTAAGTATGGCATTGCCAACGAGGTTGTTGAACTTCTCATCCGGAAATTGGAAAATGAAACTAGTTTTCATCGCAAAGTGGATTTGTTTTTTCTTGTTGATTCTATCACCCAGTGCTCACATAGTCAAAAAGGAATTGCTGGAGCTTCTTACATCCCTATAGTTCAAGCAGCATTGCCACGTCTTCTTGGCGCTGCTGCCCCTCCTGGAGCTAGTGCCCGTGAAAATCGTCGTCAATGTCACAAGGTTTTGAGGTTGTGGCTTGAGAGGAAAATTTTGCCCGAGTCTGTTATTCGCCGTCACATGGATGAAATTGGGGGTTCAAATGATGATATCACAGTTAGCTATAACTTCAGGCGTCCATCTCGTGCTGAGCGATCTGTGGATGACCCAATTAGAGAAATGGAAGGCATGCTTGTTGATGAGTATGGAAGTAATGCTACATTTCAGCTTCCTGGCCTATCTTGCCATGCATTTGATGAAGACGAAGATGAAGAATTACAAATCAATTCTTGTACGGATATGTATGGTACATCTCCAGCGGATCCCACACCCAAGTTTGGAGGATCAGAACCTTATACTATGACCCCAAATGACAAACGGCATTGTATCTTGGAGGATGTAGATGGTGAGCTTGAAATGGAAGATGTTTCAGGTCACCCAAAGGATGAGAGAACTGTATATTTGAACAGTACTGATGAAACTGATATGCTTCTTCAGAGCTCAAATAGGAATTTAGACCCAACTTCAAATATTTCAGAAGACATTTTGGCTACTCCGGAGGGTTCCCCTCCATTACCTCTTGATTCACCTCCTCCAACCCCACCATTGCCTTCTTCACCACCCCCTCCTCCATCATCTCCTCCCCCACCCCCACCCCCTCCAATATTGCAACCCCCACCTCCTCTTCCTTTACCATCCTCAGCCCCAACATTATCATTGGTTCCTCAATCATCTGGACTGCCCCAGCCATCACATGTCTCCCAGTCATTAATGCCACCTCAGTCATCATATCAGTCATCACCAAAGCTGGGGTATCAGCAGAATGTACCTCCTGACTTTAGTAACTCAACTAGTGGTAGCCAAATAGTTCAAATTGCTGGTACTTCTTTTTCTGGGGGTCACAGTAATGCAGGTATCAAGAATGAACTATATCCACAACCATCTGCTTTTGCCTTGGCTGCAGGCTGCAGCTCCCAGGAGCCCTCTGGTTTTAACCCTTCAAGACAAATAGAATATGGACAGAATGATGTGTATATAAATGCCCAAGTTCATCAACCTAACCAGCAATATCAGCAGGGTAACGCCCCATATGTTCAGAGACATACACATCCTGCCCCACCCCAAAATCCATCAAATCAGTACTCATATCAAAATCACACAGTTCAGCAACACCATCCACATGCATTCCATTCTCCCTTTCCTTTACCATCTCTTCCTGATGGTCGGAGGCAATTCGTTGCTGATGATCAATGGAGAATGGCATCCACAAGTAATCAACATCAAAATGGTGTATGGAGAGGGATAAATCCTTCATGCCCTGGTCCCCCCTTTGGGCAAGAAGGTTTCCGACCACCACTTGAAAGGCCACCATTAAGCAATGCAGGTTTTCAGCGAGGAATTTCAAGCACCCTACCTAGTGCACCAGTATCGGGACATGGTATTCCTCAGATATTACCGTCCAGGCCAGACATTACTGCTGTTAATTGTTGGAGACCCACTTGA 4224 0.4313 MPPARRRGANKANANGDFRLGDLVLAKVKGFPAWPAKISRPEDWEKAADPKKFFVQFFGTKEIAFVAPPDIQVFTSEYKNKLTARLQGKTKYFTQAVKEICAAFDELQKQKSSGDDTDDSRIGSEAPPVDEAVGNSKDTTDAMTSHTEKDNIYVSNVGSNLEGCLLKTRERGSLDEKLTESGHPKESSSVSSPLVKSKLSAGSEIKNSSKPTLKGASNVNDFGQHDNGNSVLTNGSKPRKLVTGSKRKSEFADDRNKNGGSSGTLMKVGNSTGSGDLSRSGEAFKTGKKGKDTSAVKSGSPDTLKPDSNGNTGEKSKNLISRKANLVVKNELQELMFDAKESDGKNSSMGKKNQVHAKHNMGANESLQATKKLKRMDARDELPSGHIPKDVKSALPCSTSVEDKSSKMLELKRSTSNSKAGKSSVHELLPVIKQHSQVQKTMPDSDTIASDEKKERNNLKLKGDTKNVTTKQVQRKRKAVCLHEDDDVPKTPVHGGAAKNMKSPFATEVKKGNNAHSEKSGAACRNSSQLEDAHLKEPSSEKAKADEVNPVHVPHSHHKLDSKQFPSKAAKVSSASPVKSPQPVPSTTKSNTEWSKSSKPLVKASSIATQKKADNGSSKSLLNLSSSQNPVSAHKKKLASSVEISKTTPKTLPQAVDVPVSTVDFKEPDALHVDGLEEGMVERSNIYTGSGNSETSKNMKHLIAAAQAKWKKAHSQYLSSDIHNVQWGTPSPSTVQPFFSVSSNFAQTDVQGVHEHTTSASPPTNEYHSVSQNQLDADEIEERRVGSVQRGPGGSLSGDTEAAVARDAFEGMIETLSRTKESIGRATRLAIDCAKYGIANEVVELLIRKLENETSFHRKVDLFFLVDSITQCSHSQKGIAGASYIPIVQAALPRLLGAAAPPGASARENRRQCHKVLRLWLERKILPESVIRRHMDEIGGSNDDITVSYNFRRPSRAERSVDDPIREMEGMLVDEYGSNATFQLPGLSCHAFDEDEDEELQINSCTDMYGTSPADPTPKFGGSEPYTMTPNDKRHCILEDVDGELEMEDVSGHPKDERTVYLNSTDETDMLLQSSNRNLDPTSNISEDILATPEGSPPLPLDSPPPTPPLPSSPPPPPSSPPPPPPPPILQPPPPLPLPSSAPTLSLVPQSSGLPQPSHVSQSLMPPQSSYQSSPKLGYQQNVPPDFSNSTSGSQIVQIAGTSFSGGHSNAGIKNELYPQPSAFALAAGCSSQEPSGFNPSRQIEYGQNDVYINAQVHQPNQQYQQGNAPYVQRHTHPAPPQNPSNQYSYQNHTVQQHHPHAFHSPFPLPSLPDGRRQFVADDQWRMASTSNQHQNGVWRGINPSCPGPPFGQEGFRPPLERPPLSNAGFQRGISSTLPSAPVSGHGIPQILPSRPDITAVNCWRPT 1407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02507 1407 MobiDBLite consensus disorder prediction 109 125 - -
Trre7g02507 1407 MobiDBLite consensus disorder prediction 530 565 - -
Trre7g02507 1407 MobiDBLite consensus disorder prediction 477 492 - -
Trre7g02507 1407 Pfam CID domain 808 932 IPR006569 -
Trre7g02507 1407 MobiDBLite consensus disorder prediction 108 151 - -
Trre7g02507 1407 MobiDBLite consensus disorder prediction 137 151 - -
Trre7g02507 1407 MobiDBLite consensus disorder prediction 339 638 - -
Trre7g02507 1407 SUPERFAMILY Tudor/PWWP/MBT 11 109 - -
Trre7g02507 1407 ProSiteProfiles CID domain profile. 801 942 IPR006569 -
Trre7g02507 1407 ProSiteProfiles PWWP domain profile. 20 77 IPR000313 -
Trre7g02507 1407 MobiDBLite consensus disorder prediction 370 387 - -
Trre7g02507 1407 Gene3D - 10 115 - -
Trre7g02507 1407 MobiDBLite consensus disorder prediction 1012 1031 - -
Trre7g02507 1407 MobiDBLite consensus disorder prediction 1097 1142 - -
Trre7g02507 1407 CDD PWWP_HULK 21 110 - -
Trre7g02507 1407 SMART 558neu5 808 939 IPR006569 -
Trre7g02507 1407 MobiDBLite consensus disorder prediction 1074 1193 - -
Trre7g02507 1407 MobiDBLite consensus disorder prediction 567 635 - -
Trre7g02507 1407 Gene3D - 800 945 IPR008942 -
Trre7g02507 1407 MobiDBLite consensus disorder prediction 175 323 - -
Trre7g02507 1407 MobiDBLite consensus disorder prediction 1143 1193 - -
Trre7g02507 1407 MobiDBLite consensus disorder prediction 348 367 - -
Trre7g02507 1407 MobiDBLite consensus disorder prediction 256 279 - -
Trre7g02507 1407 MobiDBLite consensus disorder prediction 296 319 - -
Trre7g02507 1407 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1048 - -
Trre7g02507 1407 SMART PWWP_4 18 75 IPR000313 -
Trre7g02507 1407 Pfam PWWP domain 21 104 IPR000313 -
Trre7g02507 1407 MobiDBLite consensus disorder prediction 446 462 - -
Trre7g02507 1407 MobiDBLite consensus disorder prediction 184 240 - -
Trre7g02507 1407 FunFam Enhancer of ag-4 2 801 944 - -
Trre7g02507 1407 MobiDBLite consensus disorder prediction 1074 1090 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02507 Trre-Chr7 20591649 20602969 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02507 - - gmx:100800279 1762.27