Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02500 ATGGCAGGAACAGCAACAGGTTGTTACAAATGTGGAAGACCAGGTCACTGGTCACGTGACTGTACTTTCTCCGCTCCCAATCCCAATCCTAACCCTAATTCCACCGCCGACGATCTTCCTCCACCTCCTCCTTCATCTTCCTTCAAGCCTTCTGGTCCTAGATCCGCCGTCGAAAAGCCCAAAAAGATCCCACGCACTCGTCCCAAACTCACTCCCGAGCTTCTTCTTTCCGATGACGGTCTCGGTTACGTTCTTCGCTATTTTCCGAGCAATTTCAAATACCACGGTCGCGGCCACGAGGTTCGTGATTTGGGTAACTTGCTTGATTTGTACTCTGAATGGCACTCTCGTTTGCTACCTTATTACTCCTTTAATCAATTTGTTCACAATGTTGAGAAAGTTGCTGCTACTAGGCGTGTTAAGACTAGCCTTAGAGAATTGAGAGAAAGAGTTGCAAATGGTGGGGATCCATCAAAATTGCGTGAACCACCAGTTGTTCACGACATTCCAGATGGTGAACAAGAAAATGGAGAAGCAAGTCATCAAGTGAATGAGGTGTTTGCAGAACCTGAAAATGTTAATGACATTCAAGAAGACATGTTGAATGATATATTTGACAACGCTACCGAAGAACCTTCTCAGCCCGTGCAAAATGTGATTAGTGCAAGTACCGACCCCAAAAGTAGCGCAGTTGAAAAGACGCCAAACGAAGTCCCAAATAGTGGAGCCAGTATGTCTAGCAATGCTGGGATAACAGCAGAGCAGAGAGCCCGTATGGAAGCAAATAGGTTGAAGGCACTAGAAAGGCGCGCAGCTCGAGCCAGCATATCACAGTCTTCCTAG 843 0.4674 MAGTATGCYKCGRPGHWSRDCTFSAPNPNPNPNSTADDLPPPPPSSSFKPSGPRSAVEKPKKIPRTRPKLTPELLLSDDGLGYVLRYFPSNFKYHGRGHEVRDLGNLLDLYSEWHSRLLPYYSFNQFVHNVEKVAATRRVKTSLRELRERVANGGDPSKLREPPVVHDIPDGEQENGEASHQVNEVFAEPENVNDIQEDMLNDIFDNATEEPSQPVQNVISASTDPKSSAVEKTPNEVPNSGASMSSNAGITAEQRARMEANRLKALERRAARASISQSS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02500 280 MobiDBLite consensus disorder prediction 210 257 - -
Trre7g02500 280 Pfam Zinc knuckle 7 22 IPR001878 GO:0003676|GO:0008270
Trre7g02500 280 MobiDBLite consensus disorder prediction 33 49 - -
Trre7g02500 280 Gene3D - 4 69 - -
Trre7g02500 280 PANTHER TIMELESS INTERACTING-RELATED 3 278 IPR040038 GO:0000076
Trre7g02500 280 MobiDBLite consensus disorder prediction 20 71 - -
Trre7g02500 280 MobiDBLite consensus disorder prediction 210 253 - -
Trre7g02500 280 Pfam Replication Fork Protection Component Swi3 69 150 IPR012923 GO:0005634|GO:0006974|GO:0031297
Trre7g02500 280 SMART c2hcfinal6 7 23 IPR001878 GO:0003676|GO:0008270
Trre7g02500 280 ProSiteProfiles Zinc finger CCHC-type profile. 8 21 IPR001878 GO:0003676|GO:0008270
Trre7g02500 280 SUPERFAMILY Retrovirus zinc finger-like domains 6 22 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02500 Trre-Chr7 20549808 20552971 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02500 K10998 - gmx:100799216 374.015