Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02472 ATGGGAGACGAAGGTATAGTGAGAGGTGTCACAAGGCAGACAACCCCTGGGAAGGCTACTATATTGGCTCTTGGCAAGGCATTCCCTCACCAACTTGTGATGCAAGAGTATTTAGTTGATGGTTATTTTAGGGACACTAATTGTGACAATCCTAAGCTTAAGCAGAAACTTGCTAGACTTTGCAAGACAACCACAGTAAAAACAAGGTATGTTGTTATGAATGAAGAGATACTAAAGAAATATCCAGAACTTACTGTCGAAGGCACATCGACTGTAAAACAACGTTTAGAGATATGTAACGAGGCAGTAACACAAATGGCCATTGAAGCTTCTCAAGTTTGCCTAAAGAATTGGGGTAGACCCTTATCAGACATAACTCATGTAGTTTATGTTTCATCTAGTGAAGCTAGATTACCCGGTGGTGACCTATACTTGTCAAAAGGACTAGGACTAAACCCTAAAATTCAAAGAACCATGCTATATTTCTCTGGATGCTCGGGAGGCGTAGGTGGCCTTCGTGTTGCAAAAGACATAGCTGAAAACAACCCTGGAAGTAGAGTTTTGCTTGCTACTTCGGAAACTACAATTATTGGATTCAAGCCACCAAGTGTTGATAGACCTTATGATCTTGTTGGTGTGGCACTCTTTGGAGATGGTGCTGGTGCTATGATAATTGGCGCAGACCCGATACTTGAAATTGAGACACCATTGTTTGAGCTTCATACTTCAGCTCAGGAGTTTATACCAGACACAGAGAAGAAAATAGATGGGCGGCTAACGGAGGAGGGCATAAGTTTCACGCTAGCGAGAGAACTTCCACAGATAATCGAAGACAATGTTGAGGGATTCTGTAATAAACTAATTGATGTTGTTGGGTTGGAGAATAAGGAGTACAATAAGTTGTTTTGGGCTGTGCATCCAGGTGGGCCTGCAATATTGAACCGTGTGGAGAAGCGGCTTGAGTTGTCGCCGGAGAAGCTGATTGCTAGTAGAAAAGCTCTAATGGATTATGGAAACGCTAGCAGCAATACTATTGTTTATGTGCTGGAATATATGCTAGAAGAGGAAAAGAAGATTAGAAAAGCAGGTGGAGGAGATTCTGAATGGGGATTGATACTTGCTTTTGGACCTGGAATTACTTTTGAGGGGATTCTAGCAAGGAACTTGTGTGCATGA 1176 0.4218 MGDEGIVRGVTRQTTPGKATILALGKAFPHQLVMQEYLVDGYFRDTNCDNPKLKQKLARLCKTTTVKTRYVVMNEEILKKYPELTVEGTSTVKQRLEICNEAVTQMAIEASQVCLKNWGRPLSDITHVVYVSSSEARLPGGDLYLSKGLGLNPKIQRTMLYFSGCSGGVGGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSVDRPYDLVGVALFGDGAGAMIIGADPILEIETPLFELHTSAQEFIPDTEKKIDGRLTEEGISFTLARELPQIIEDNVEGFCNKLIDVVGLENKEYNKLFWAVHPGGPAILNRVEKRLELSPEKLIASRKALMDYGNASSNTIVYVLEYMLEEEKKIRKAGGGDSEWGLILAFGPGITFEGILARNLCA 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02472 391 FunFam Chalcone synthase 2 4 236 - -
Trre7g02472 391 SUPERFAMILY Thiolase-like 12 232 IPR016039 GO:0016746
Trre7g02472 391 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 12 389 IPR011141 GO:0009058|GO:0016747
Trre7g02472 391 FunFam Chalcone synthase 1 237 390 - -
Trre7g02472 391 Pfam Chalcone and stilbene synthases, C-terminal domain 239 389 IPR012328 -
Trre7g02472 391 CDD CHS_like 19 385 - -
Trre7g02472 391 SUPERFAMILY Thiolase-like 216 387 IPR016039 GO:0016746
Trre7g02472 391 Gene3D - 4 236 IPR016039 GO:0016746
Trre7g02472 391 Gene3D - 237 388 IPR016039 GO:0016746
Trre7g02472 391 Pfam Chalcone and stilbene synthases, N-terminal domain 11 229 IPR001099 -
Trre7g02472 391 PIRSF PKS_III 7 390 IPR011141 GO:0009058|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02472 Trre-Chr7 20369117 20370549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02472 164 389 Miscellaneous Gene Families AT3G52160 25.328 1.17e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02472 - - vun:114168705 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02472 7 20369117 20370549 Trre7g02472 7 20369117 20370549 ECH