Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02466 ATGGCAAGTGTTTCGTCGGAAGAAGAAGTTTCTGAGCGTTGTGGAAGTTATAGTCCGAGTGCTGACATCAGCGAATCGGAGAGTTGTAGTAGTTTTTGTGGTCGTCGTTTCGATGCCGAAGGAGCTTCAAGTTCCGCTAATCTCTCGCCACGTCAGCTCGCCGCTCATTTTAACCTACCCACGGCGGCGCAGGTTATGCTTCCGGTTATCGGTGGTAAAGATGTTGCTGTTTGGGATCACAAACGTGATCTGGATTTATCCGAAGTTGAAATGATGAAGGAACGTTTCGCTAAGCTGCTTTTAGGAGAAGACATGTCTGGTGGTGGAAAGGGGGTTTGCACTGCGCTTGCTATCTCTAACGCTATCACGAATCTCTCCGCAACTGTGTTTGGAGAGTTATGGAGGTTAGAGCCACTAGCACCACAGAAAAAAGCAATGTGGCAAAGAGAAATGGACTGGCTACTGTGTGTGAGTGATTCGATTGTCGAGTTGGTACCTTCTGTTCAGCAGTTTCCAGGTGGGGGAACCTATGAAGTGATGGCAACACGGCCTCGTTCTGATTTGTACGTCAATCTTCCTGCTTTGAAGAAGCTTGATGGAATGCTGTTAAGTATGCTGGATGGATTTTGTGATACACAGTTTTGGTATGTTGATAGGGGAATTGTGTTGGGTGATTCTAAGGATTGTGATGAGTATGATAGACCTTCTGTTAGGCAAGAAGAGAAATGGTGGCTTCCTTCTCCCAAGCTTCCGCCAAATGGGTTGTGTGAGGATGATAGGAAAAGGTTGCAGCAGTGTAGGGATTGCACTAACCAGATATTAAAGGCTGCCATGGCAATTAATAGTTCTGTTCTTGCTGAAATGGAAATTCCTGCTGCCTATGTAGAATCCTTGCCCAGGAATGGTAAAGCTTGTCTAGGGGATATAATATATCGGTACATAACTGCTGCCCAGTTCTCGTCTGAATGTCTCCTAGATTGCCTGGATCTATCATCTGAGCACCACACACAGGATATAGCTAATAGAATTGAGGCTGCTATAAATGTATGGAAATTGAAAGACGATAAGAAAGTTAAAAATTCGGCGAAAGCCCGAAGGTCTTGGGGTGGAAAAGTAAAAAGCCTTGTTGCTGACGGTGATAAGAACCATTTTCTTGCCCAACGTGCAGAGACACTACTGCAAAACTTGAAACATCGATTTCCTGGGCTCCCTCAAACAGCACTAGATATGGCCAAGATACAATATAATAAGGATGTAGGGCAGTCTATTCTTGAAAGTTATTCCAGGGTGATGGAGAGCTTGGCATTTAACATAATGGCCAGGATCGATGATGTCCTTTACGTAGACGATAGTATTAAACGATGTGCAGCTGCAGATTCTATCTTGTTCGGTAGGGGAGGCTTTGGCGGTCGGCCTATTCAAAAGCGAATGTCTCCCAGCCCCTTCTCAATTCAACACACCCCATATGCCTCTCCTTTTGGAACCCCATCCTCCTCTCCTGCTAGCGGGAGCTCTTGCAGTCCACATAGAACACATGTTGTCAAGAGGAATACCAAGGGAAAAGATTCAAAGACTGGAAAGTTTTCCCCAGCTGATTTTGAGAAGGTATGGTCATACACGGGAAAACTCAATGTAAGGAGAGTTTCTGGCGAGGCCCCGGAAAGAAACTGA 1671 0.4548 MASVSSEEEVSERCGSYSPSADISESESCSSFCGRRFDAEGASSSANLSPRQLAAHFNLPTAAQVMLPVIGGKDVAVWDHKRDLDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWQREMDWLLCVSDSIVELVPSVQQFPGGGTYEVMATRPRSDLYVNLPALKKLDGMLLSMLDGFCDTQFWYVDRGIVLGDSKDCDEYDRPSVRQEEKWWLPSPKLPPNGLCEDDRKRLQQCRDCTNQILKAAMAINSSVLAEMEIPAAYVESLPRNGKACLGDIIYRYITAAQFSSECLLDCLDLSSEHHTQDIANRIEAAINVWKLKDDKKVKNSAKARRSWGGKVKSLVADGDKNHFLAQRAETLLQNLKHRFPGLPQTALDMAKIQYNKDVGQSILESYSRVMESLAFNIMARIDDVLYVDDSIKRCAAADSILFGRGGFGGRPIQKRMSPSPFSIQHTPYASPFGTPSSSPASGSSCSPHRTHVVKRNTKGKDSKTGKFSPADFEKVWSYTGKLNVRRVSGEAPERN 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02466 556 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 9 474 IPR038937 GO:0005085
Trre7g02466 556 Gene3D PRONE domain, subdomain 1 319 459 - -
Trre7g02466 556 MobiDBLite consensus disorder prediction 478 511 - -
Trre7g02466 556 FunFam Rop guanine nucleotide exchange factor 1 80 320 - -
Trre7g02466 556 Gene3D PRONE domain, subdomain 1 79 318 - -
Trre7g02466 556 MobiDBLite consensus disorder prediction 1 25 - -
Trre7g02466 556 ProSiteProfiles PRONE domain profile. 79 459 IPR005512 GO:0005085
Trre7g02466 556 MobiDBLite consensus disorder prediction 472 529 - -
Trre7g02466 556 FunFam Rop guanine nucleotide exchange factor 14 321 458 - -
Trre7g02466 556 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 87 453 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02466 Trre-Chr7 20336245 20339130 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02466 - - gmx:100789706 925.62