Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02448 ATGTCTGCCTTTGGGGAAAAGTTAGGAAAATTAGCAGCACTATTTCCAGTAATGTACTTATCAGGAGGTACTTGTGTAATACTTATAATCACCGGTGGCGGGACAATGAAACAATTATTCAATATTCTTTGCGAAAATGATAATGGAGTTAAGACGTGTAGCGCGCACTCGCTGAGCGGGGTGGAGTGGTTCTTAGTGTTTACTTGTGCTGCTATACTTGTTGCTCAGTTGCCTAATCTCAATTCAATGGCTGCCGTCTCTTTGGTGGGGGCTGTTGCTTCAATCACTTACTGCACTCTCTTTTGGTCACTTTCTGTTAAGAAGGGTAGGCCAAAGGATGTGTCCTATAATACAACATTGGTGTCACAAGAATCATCCATGGTGAAGATTAGTGATATTATGAATGCTATTGGAATTATTGTGTTAGCTTTTAGAGCGCACAACATTGTGCTAGAAATACAAGGGACACTTCCTTCAAACGTCAACGAAACGTCAAAAGGACCAATGCGTAGAGGAGTCACAATTTCATATATACTCATTGCCGCATGTGTCTTTCCCCTCGCAATTGCCGGATTTTGGGCATATGGAAATCAGATACCTGATCGAGGATTGTTAACTGCATTCCCACAATTCCACAAACAACAAGTAACAAAATTCTCAATTGGTGCAATCTATGTTCTAGTCATACTACATTGTTTGACTAGCTACCAAGTCTATGCTATGCCTGTTTTTGACAATTTGGAGCTAAAATACACAACCATAAAGAATCAGAAATGTCCACGATTTGTGAGAACATGCTTACGCTTAATCTTTGGAGGGTTCACATTTTTTATAGCGGTTACATTCCCTTTCTTGCCAAGCCTTGCAGCTCTCCTTGGTGGAATTACCATTGTGCCCGTCACATATGCCTACCCTTGTTTCATGTGGCTAGCTATTAAGAAACCTCGTACAAAGGGTGCAGTATGGTGCTTCAACCTCGTACTTGGTTGCTTAGGGATGGTTCTCGGTGCTCTTTTGGTGGCCGCTGCTATAAGGAATTTGGCCGACAAAGGATTACATGCTAACTTCTACAAACCATAA 1080 0.4157 MSAFGEKLGKLAALFPVMYLSGGTCVILIITGGGTMKQLFNILCENDNGVKTCSAHSLSGVEWFLVFTCAAILVAQLPNLNSMAAVSLVGAVASITYCTLFWSLSVKKGRPKDVSYNTTLVSQESSMVKISDIMNAIGIIVLAFRAHNIVLEIQGTLPSNVNETSKGPMRRGVTISYILIAACVFPLAIAGFWAYGNQIPDRGLLTAFPQFHKQQVTKFSIGAIYVLVILHCLTSYQVYAMPVFDNLELKYTTIKNQKCPRFVRTCLRLIFGGFTFFIAVTFPFLPSLAALLGGITIVPVTYAYPCFMWLAIKKPRTKGAVWCFNLVLGCLGMVLGALLVAAAIRNLADKGLHANFYKP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02448 359 Pfam Transmembrane amino acid transporter protein 3 343 IPR013057 -
Trre7g02448 359 PANTHER OS05G0424000 PROTEIN-RELATED 2 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02448 Trre-Chr7 20124368 20126064 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02448 2 359 Organic Solute Cotransporters AT1G47670 46.089 1.05e-104 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02448 K26385 - gmx:100817315 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02448 7 20124368 20126064 Trre7g02448 7 20124368 20126064 ECH