Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02437 ATGGAAGAAGATACAAAAGCCATTTCAGAAGTTTCAGTGACAAAGGTTGTTGAAGAGGCGGATCATAAAGATGTTAACATCAAGGAAACAAATGGAGACTTGCTGCCTAAGGAAACGGCCGAAGGAAAGAAAGACGAGGAAGATAATGCCTCTGATGGAGAATTCATTAAAGTCGAGAAGGAAGAAAATGTGTTGGATGATACATCCCACAAAGCAGAAAGAAGCTCAGAATCTCCCAGCAGAGAGTTTCTTGAAGCACAAGAGAAGGTCCGGGAACTGGAGGTTGAACTGAAAACACTAGCAGAATCTTTAAAGACCTCTGAACATGAAAATTCTCAGCTGAAGGGAGAGATCTCAAACACAAAAGAAAAACTCGAAGAAAGTGGAAAGAAAAATGAAGAGCTTGAACTAAGTCACAAGAAATTGCAGGAGCAGATTATTGAAGCCGAGAATAAATACAATCTGCAGCTCAGCACTCATGAAGAGGCATTGAAAAGTCAAGAAGTTAAGCAGACAGAGCTTCTTAAGGTGAAGGAAGCATTTGATGACATGAACATTGAGCTTGAAAGCTCGAGAAAGAAGTTGGAGGAATTGCAGCATGAGCTGCAACTTTCTAAAGACGAGGTACAGAAGTTTGAGGAGCTGCATAAGCAAAGTAGTTCGCATGCTGAATCTGAGGGAAACAAGGCGGTAGAATTTGAGAGACTGCTTGAAGAAGAGAAATTGAATGCGAAAAGCTTGGAAGATGAGATGGCTTCTCTGAAGGAAGAATTGAAGGGAGTTAATGATAAGATTGCTGAAAATCAAAAGGTAGAAGAAGCACTTAAAACAACTACCGCAGAACTCTCTACCATCCAAGAGGAGTTGTCACTCTCCAAAACACAGCTGTTGGAAGTTGAGCAAAGACTGTCTTCAAGAGACTCGCTAGTAGACGAGTTGACCGAGGAATTAAACCTGAAAAAGACTTCAGAAACTCAGCTAAAAGAAGAGATGTCAGCACTTCAAAATTTATTTGTAACTACAAAAGAAGAGCTACAAGAAAAAGTTTCTGAGTTGGAAAGTGCGAGGCTGAAACTGCAGGAGGAGGAAAAGTTGAAAGAATCAGTAGAAGTTGCATTCAAGAGTCAAGAAGCACAGTTTGTTGCGGTACAAGAGGAGCTGACTAAGCTTAAAGCAGAGAAAGAAATACTTGAGGGAACTGTTGAAGATCTAACCGTTAATGCGAAACACTTTAAGGAGTTGAGCACTGATTTAGAGGAGAAACTAAAACTTTCAGACGAAAATTTTAATAAAACAGATTCTCTTTTATCTCAGGCGCTTTCAAACAATTCAGAGCTTGAGCAGAAGGTGAAGTCTTTGGAAGATCTTCATAATGAATCTGGAGCTGTTGCAGCTACTGCTAGTCAAAGGAGTCTCGAGCTTGAGGGACATATTGAAGCGACAAATGCAGCTGCAGAAGAAGCAAAATTGCAGCTAAGAGAGCTGGAAACACGGTTCATAGCGGCAGAGCAGAAGAATGTGGAGCTTGAGCAACAATTGAATTTAGCACAATTGAAAGCCAATGATGCTGAGAGAGACGTGACTGAATTCTCTGAGAAAATTGCACATCTCGACGCAAAATTGAAAGACGCTGCTGAAGAGAAGAATCTAATTAATAGCTTACTGCAAGAGCACATGGATAAGGTAAGTCAACTTGAATCAGACTTAATTCAATCATCCAAGCAGAATTCAGAATTGGAGGAGAAGTTGAAGACAGTCAATGAAAAAGTTTCTGAGCATGAAGATCGAGCCACCATGTACAATGAGCGCAGCCGAGAACTGGAAGATTTGATTCAGAGCTCTCATTCCAAATCGGAAAGTGCTGAAAAGAAAGTGAGTGAGTTGGAGTTGCTACTTGAAACGGAGAAATACAGAATTCAGGAGCTTGAACAACAAATAAGCACATTAGAAAAGAGATGTAGTGATTCAGAAGAAACTTCCAATAAACATCTCGACAATGTGTCTTATCTGACATCAGAACTCGAAGTGTTTCGAGAGCGAACCTCAAGCCTTGAAAGTACACTGAAAGCGGCAAATGAAAAGGAAATAGAGGTAAAGGATTCCTTAAATGCTGTGACAGAAGAAAAGAAAAAGTTAGAAGATGGTCTAAACAGTTTGAGTGAGAAGCTTGCTGAGGCAGAAAACCTATTGGAGATTGTGAGGGATGATTTAAATCTTACACAAGCTAAGCTGCAAAGTACTGAAAATGATCTCAAGGCTGCAGAACTGAGAGAGAGTGAGATAATTGAAAAACTTAAAGCTAGTGAAGAAAATCATGTTGTGAGAGGAAGAGACATAGAGTATACTGCTGCAAGAAACTTAGAACTCGAATCGTTACATGAAACTTTGACGAGAGATTCCGAACAGAAGCTCAAAGAAGCTATAGAGAAATTCAACAGCAAAGATTCTGAGGTTCAATCTCTTCTTGAGAAAATCAAGATTTTGGAGGAAACTATTGCAGGAGCCGGGGAACAGTCCATATCTTTGAAGAGTGAATTTGAAGAGAGTTTGAGCAAAGTCACTGCTTTGCAAACTGAAAATGAAGATTTGAAAAGGCAAATTGTTGAAGCTGAGAACAAGACTTCACAGTCATTTTCTGAGAATGAATTACTGGTTGGAACAAACATTCAATTGAAAACAAAGATTGATGAACTTCAGGAGTCATTGAACAGTGCTCTAACGGAGAAGGATGTTACTTCTAAAAATCTCAATGCCGAGCTGGAGGAGAGTCACATAAAATTAAAGCATCTTGAAGCACTAGTTGAGGAGCTGCAAAACAAGTCACTCGACCGTGAAAACAAATTTGCTGGAATAAGTGAGGAAAAATTGAAACTAGTTCAGGAAATAGCCGTCTATGAATCCAAATTAAGTGATTTACAGTCAAAGCTCTCTGCAGCACTTGTCGAGAAGGAGGAAACAGTTAAAGAGGTACTCACATCCAAAAATGCCGCTGAAGATTTGGTTACAAAGCATAGTGAAGAACTGCAGACATTGAAGTCTCAGATATCTTCGGTAATCGATGAGAAGAACTTGCTCAATGAGACTAATCAGAATTTAAAGAAGCAACTTGAGTCTTTGATACTTGACCTTGAAGAGAAGTTGAAGGATCATCAGAAAAATGAAGACTCTTTGAAATCTGAGGTTGAAACTCTCAAAACTGAGATTGCTGATAAATCTGCATTGCAAAGCCGGCTGCAGGAAATTGAAGCGCAACTTGCGAAAGCTGAATCTAGACTACATGAAGAGGTTGGAAGTGTTCAGGCTGCTGCTTCTCAAAGAGAAATTGATTTGAGTTCAAAATTTGAAGATTATGAACAAAAGGTCAATGAAATAAATGTGCTGAATGGAAAAGTGGTAGAACTTGAGAAAGAGTTGCAACTTGCGCAGGAGGCTACTATAGCTAACCAGAAAGGAGCAGAATCTCAGAAGTTGGAACTAGAAGCAGCCTTGAAGAATTCTCTAGAGGAACTTGAAACTAAGAAAAAGGAAATCTCTCTTCTGCAGAAACAAGTAATAGAGTTTGAGCAGAAATTGCAACAGGGTGTTAATAAAATCTCAATCAAGGGTGAGGAGAATTTTGATAAGAAAGATGGGTTAGAAGTGAAATCCAGAGACTTTAGCATCCCGTCTCCATCTAAAAGGAAGAGCAAGAAAAAGTCAGAAGCAACAACCGCTCAAGCATCATCATCATCTTCATCCGAGACTCATATTCAAACCGGCCAGGATTCACCTATCATAAATTTCAAGTTCATCCTCGGAGTAGCAATTGTATCCATTATCTTCGGCGTAATTCTTGGGAAGCGTTATTAA 3849 0.3952 MEEDTKAISEVSVTKVVEEADHKDVNIKETNGDLLPKETAEGKKDEEDNASDGEFIKVEKEENVLDDTSHKAERSSESPSREFLEAQEKVRELEVELKTLAESLKTSEHENSQLKGEISNTKEKLEESGKKNEELELSHKKLQEQIIEAENKYNLQLSTHEEALKSQEVKQTELLKVKEAFDDMNIELESSRKKLEELQHELQLSKDEVQKFEELHKQSSSHAESEGNKAVEFERLLEEEKLNAKSLEDEMASLKEELKGVNDKIAENQKVEEALKTTTAELSTIQEELSLSKTQLLEVEQRLSSRDSLVDELTEELNLKKTSETQLKEEMSALQNLFVTTKEELQEKVSELESARLKLQEEEKLKESVEVAFKSQEAQFVAVQEELTKLKAEKEILEGTVEDLTVNAKHFKELSTDLEEKLKLSDENFNKTDSLLSQALSNNSELEQKVKSLEDLHNESGAVAATASQRSLELEGHIEATNAAAEEAKLQLRELETRFIAAEQKNVELEQQLNLAQLKANDAERDVTEFSEKIAHLDAKLKDAAEEKNLINSLLQEHMDKVSQLESDLIQSSKQNSELEEKLKTVNEKVSEHEDRATMYNERSRELEDLIQSSHSKSESAEKKVSELELLLETEKYRIQELEQQISTLEKRCSDSEETSNKHLDNVSYLTSELEVFRERTSSLESTLKAANEKEIEVKDSLNAVTEEKKKLEDGLNSLSEKLAEAENLLEIVRDDLNLTQAKLQSTENDLKAAELRESEIIEKLKASEENHVVRGRDIEYTAARNLELESLHETLTRDSEQKLKEAIEKFNSKDSEVQSLLEKIKILEETIAGAGEQSISLKSEFEESLSKVTALQTENEDLKRQIVEAENKTSQSFSENELLVGTNIQLKTKIDELQESLNSALTEKDVTSKNLNAELEESHIKLKHLEALVEELQNKSLDRENKFAGISEEKLKLVQEIAVYESKLSDLQSKLSAALVEKEETVKEVLTSKNAAEDLVTKHSEELQTLKSQISSVIDEKNLLNETNQNLKKQLESLILDLEEKLKDHQKNEDSLKSEVETLKTEIADKSALQSRLQEIEAQLAKAESRLHEEVGSVQAAASQREIDLSSKFEDYEQKVNEINVLNGKVVELEKELQLAQEATIANQKGAESQKLELEAALKNSLEELETKKKEISLLQKQVIEFEQKLQQGVNKISIKGEENFDKKDGLEVKSRDFSIPSPSKRKSKKKSEATTAQASSSSSSETHIQTGQDSPIINFKFILGVAIVSIIFGVILGKRY 1282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02437 1282 Coils Coil 1149 1190 - -
Trre7g02437 1282 Coils Coil 804 838 - -
Trre7g02437 1282 MobiDBLite consensus disorder prediction 102 136 - -
Trre7g02437 1282 Coils Coil 181 215 - -
Trre7g02437 1282 Coils Coil 1117 1144 - -
Trre7g02437 1282 MobiDBLite consensus disorder prediction 1235 1251 - -
Trre7g02437 1282 Coils Coil 846 880 - -
Trre7g02437 1282 Coils Coil 702 771 - -
Trre7g02437 1282 SUPERFAMILY Tropomyosin 382 611 - -
Trre7g02437 1282 Coils Coil 625 659 - -
Trre7g02437 1282 Coils Coil 230 288 - -
Trre7g02437 1282 MobiDBLite consensus disorder prediction 575 597 - -
Trre7g02437 1282 PANTHER EARLY ENDOSOME ANTIGEN 1 916 - -
Trre7g02437 1282 Coils Coil 478 610 - -
Trre7g02437 1282 MobiDBLite consensus disorder prediction 1216 1234 - -
Trre7g02437 1282 Coils Coil 310 330 - -
Trre7g02437 1282 Coils Coil 994 1098 - -
Trre7g02437 1282 Coils Coil 888 947 - -
Trre7g02437 1282 Coils Coil 83 159 - -
Trre7g02437 1282 Gene3D - 462 593 - -
Trre7g02437 1282 MobiDBLite consensus disorder prediction 1216 1251 - -
Trre7g02437 1282 Coils Coil 674 694 - -
Trre7g02437 1282 Coils Coil 342 407 - -
Trre7g02437 1282 Coils Coil 955 989 - -
Trre7g02437 1282 MobiDBLite consensus disorder prediction 572 597 - -
Trre7g02437 1282 Coils Coil 436 456 - -
Trre7g02437 1282 MobiDBLite consensus disorder prediction 21 87 - -
Trre7g02437 1282 SUPERFAMILY Tropomyosin 611 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02437 Trre-Chr7 19997550 20003063 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02437 - K20283 mtr:11442834 1791.55