Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02433 ATGAATACTCTCATCCGATCCACTCTCAGAACCAAGAAAGCTGAAGCTTTCGTATGTGCCGCGGTTCCCTTATGGTGCAGATCAAACAGTACAAAATCTTCTGTGCCAACAGATAATTCAACTTCTGATGCGAAAACTGGCCAAGGGTTCAAGGGCCATGATATGCTTGCCCCCTTCACACCTGGGTGGCATACTACTGATTTGAATCCTTTGATTATTGAAAAGTCTGAGGGAAGCTATGTATATGACATTAATGGGAAGAAATATCTTGACTCACTTGCTGGTCTATGGTGCACCGCTTTAGGGGGAAGTGAGCAGCGCCTTGTTGATGCTGCAACTGCACAGTTGAAGAAGTTGCCATTTTACCATTCCTTTTGGAATCGAACCACAAAACCTACATTGGATCTAGCCCAGGAGCTGCTAGAAATGTTTACAGCCAGAAAAATGGCTAAAGCTTTTTTTGTTAATAGTGGATCAGAAGCCAACGATACTCAGGTCAAAATTGTTTGGTATTATAACAATGCACGTGGAAGACCAAATAAAAAGAAATTCATAGCTCGAACTAAATCGTATCATGGTTCAACAATGATAGCAGCCAGTCTTTCTGGTCTATCGCCTTTGCATCAAAGCTTTGATCTGCCAGCACCTTTTGTTTTGCATACTGATTGTCCACACTACTGGCGGCATCATCTTCCAGGTGAGACAGAGGAAGAATTTTCGACCAGATTGGCCAAGAATTTGGAGGAGCTAATTCTGAAAGAGGGACCGGAGACGATTGCTGCATTTATTGCAGAGCCAGTGATGGGGGCTGGAGGTGTCATACCTCCACCAGCAACTTATTTTGAGAAGATCCAAGCTGTTATCAAGAAGTATGATATCCTATTTATTGCGGATGAGGTGATTTGTGCCTTTGGGAGACTTGGGGCAATGTTTGGTTCGGACAAATATAACATTAAGCCAGATCTTGTTTCCTTGGCTAAGGCACTCTCTTCTGGATACTTGCCAATTGGAGCTATCCTTGTGAGCCCAGAAATTGCTGAAGTAATTCATTCACAAAGCAGCAAACTTGGTTCATTTTCTCACGGGTTCACTTATTCTGGATCACCCGTGCCCTGTGCTGTTGCACTTGAAGCACTCAAAATATACAAGGAGAGAAATATTGTTGACGTAGTGAACAAGATAGCTCCAAGGTTCCAAGATGGCTTAAAAGCTTTTTCTGACAGTCCCATCATTGGAGAGATACGGGGATTAGGCTTGATCTTAGCGACTGAGTTTGTTGACAACAAATCGCCTAATGATCCATTTCCTCCTGAATGGGGAGTAGGTGCTTATTTCGGAGCACAATGTGAAAAGCGTGGGATGTTAGTTCGGGTAGCTGGAGATCTTATCATGATGTCTCCACCATTTATTATATCACCTGAAGAAGTTGATGAGTTGATCAGCATTTATGGGAAAGCTTTAAGAGAGACAGAAAAGAGAGTCCAAGAGCTCAAGTCTCAATCCAAATTAGCTTGA 1515 0.4284 MNTLIRSTLRTKKAEAFVCAAVPLWCRSNSTKSSVPTDNSTSDAKTGQGFKGHDMLAPFTPGWHTTDLNPLIIEKSEGSYVYDINGKKYLDSLAGLWCTALGGSEQRLVDAATAQLKKLPFYHSFWNRTTKPTLDLAQELLEMFTARKMAKAFFVNSGSEANDTQVKIVWYYNNARGRPNKKKFIARTKSYHGSTMIAASLSGLSPLHQSFDLPAPFVLHTDCPHYWRHHLPGETEEEFSTRLAKNLEELILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVIKKYDILFIADEVICAFGRLGAMFGSDKYNIKPDLVSLAKALSSGYLPIGAILVSPEIAEVIHSQSSKLGSFSHGFTYSGSPVPCAVALEALKIYKERNIVDVVNKIAPRFQDGLKAFSDSPIIGEIRGLGLILATEFVDNKSPNDPFPPEWGVGAYFGAQCEKRGMLVRVAGDLIMMSPPFIISPEEVDELISIYGKALRETEKRVQELKSQSKLA 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02433 504 FunFam Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, probable 105 385 - -
Trre7g02433 504 FunFam Class III aminotransferase 56 104 - -
Trre7g02433 504 Gene3D Aspartate Aminotransferase, domain 1 71 487 IPR015422 GO:0003824
Trre7g02433 504 Pfam Aminotransferase class-III 70 486 IPR005814 GO:0008483|GO:0030170
Trre7g02433 504 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 295 332 IPR005814 GO:0008483|GO:0030170
Trre7g02433 504 Gene3D - 105 387 IPR015421 GO:0003824
Trre7g02433 504 SUPERFAMILY PLP-dependent transferases 56 489 IPR015424 -
Trre7g02433 504 Coils Coil 480 504 - -
Trre7g02433 504 CDD OAT_like 55 487 IPR005814 GO:0008483|GO:0030170
Trre7g02433 504 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 42 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02433 Trre-Chr7 19923758 19930695 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02433 K16871 - gmx:100815181 863.988