Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02403 ATGGATACACTTCAAGCCACATACAAAGACGAAGAAGAAGATGAAGAAGAAAACCTTCAATCCACCACCACAACCGTCACCGTTCAATCTGTTGTTTCCGCCGCTACCGAAATGGAATCAACAGATGTTCCTCCGGTTACTACCAGCACTCCTTCCGATACCCCTACCGAACACCAAAACGACGGCAAATCGGAGCTTGATCCCTCCGACGGTCCTTCCTCTGACGAAGCCGCATCAAACGGCTCTGCGGAACAGAAGAATTCACCGAAGCGTAGTAGAGAAGAAGGTGATGAAGACGAAGAAGAACCGATTCCGAAGAAGCAGAAGCAATTGTCCTCTCTGAATGCTGTTAAGGATGAACCGATGATATTGACGGAGGAAAACAACGGGATAGACAATGCTGCTGCGAGAACTGCAACAACAATGACGCCGACGAATGGAACTGCTAAGAAAACGAAGAAAAAGAATAATAATGTGTGGGCAACGAAATCGACGAGGAAAGGGAAAAAGAAAAGCAAAAACAACAATAACAATAATAACAATGGTAATAACCCTACAAATGGTGGTGAAGATAGTGTTCTGATAACTCCGGTACAAAGGTTCCCGGACAAAAGTGACGATACACCGGATATGAAGATATGTTTATCGAAGGTATACAAAGCGGAGAAAGTTGAATTGAGTGAGGATAGGTTGAGTGCAGGGAGCACAAAGGGTTATAGAATGGTTAGGGCAACAAGAGGTATAGTGGAAGGAGCTTGGTACTTTGAGATAAAGGTTGTGAGGTTAGGGGAAAGTGGACATACGCGGTTGGGTTGGACAATGGAGAAGGGTGATTTGCAGGCACCTGTTGGGTATGATGGGAATAGTTTTGGGTATAGGGATATTGATGGTAGTAAGATTCATAAGGCTTTGAGGGAAAAATATGGTGATGAAGGTTATGGAGAAGGTGATGTTATTGGGTTTTATATTAATTTGCCTGATGGAGATAAGTATGCACCAAAAAATCAGAATTTGGTTTGGTATAAAGGACAACGGTATGTTTCGCAAGATGCTAAGGAAGATCCACCCAAAGTTGTGCCTGGAAGTGAAATATCTTTCTTTAAAAATGGTGTATGCCAAGGTGTAGCTTTCAAGGACCTCTTTGGTGGTCGTTACTATCCTGCTGCTTCAATGTATACTCTTCCTAATGAACCAAACTGCACAGTAAAGTTCAACTTTGGTCCAGACTTCGATTGTTTTCCTGAGGATTTCAATGAAAGGCCAATTCCCAAGCCAATGATTGAAGTTCCTCATCATGGTTTTGACAATCGAGTTGAAAATGGGGAGTCCAATGCAAATAAATCAAATGGAGAATTGAATGAGAAGAAATCAATTGGAGAGGTGAATGAGAAGAAATCAAATGGAGAGTTGAATGAAAAGAAACCAAATGAAGAGCCGAATGAGAAGAAACCAAATGAAGAACCGAATGAGAAGAAACCAAATGAAGAGCTGAATGAGAAGAAACCAAATGAAGAGCCGAATGAGAAGAAACCAGATGAAGAGCCGAATGAGAAGAAACCAGATGAAGAGCCGAATGAGAAGAAACCAGATGAAGAGCTGAATGAGAAGAAACCAAATGAAGAGCCGAATGAGAAGAAACCAAATGAAGAGCCGAATGAGAAGAAACCAAATGAAGAGCCGAATGAGAAGAAACCAGATGAAGAGCTGAATGAGAAGAAACCAGATGAAGAGCCGAATGTGAAGAAACCAGATGAAGAGCTGAATGAGAAGAAACCAAATGAAGAGCCGAATGTGAAGAAACCAGATGAAGAACGGAAGGAGAAAAAACCAAATGAAGATTCAGAAGAGAAGAAATCAAATGAAGAGTCGGAAGAGATGGAATCTTAG 1887 0.4171 MDTLQATYKDEEEDEEENLQSTTTTVTVQSVVSAATEMESTDVPPVTTSTPSDTPTEHQNDGKSELDPSDGPSSDEAASNGSAEQKNSPKRSREEGDEDEEEPIPKKQKQLSSLNAVKDEPMILTEENNGIDNAAARTATTMTPTNGTAKKTKKKNNNVWATKSTRKGKKKSKNNNNNNNNGNNPTNGGEDSVLITPVQRFPDKSDDTPDMKICLSKVYKAEKVELSEDRLSAGSTKGYRMVRATRGIVEGAWYFEIKVVRLGESGHTRLGWTMEKGDLQAPVGYDGNSFGYRDIDGSKIHKALREKYGDEGYGEGDVIGFYINLPDGDKYAPKNQNLVWYKGQRYVSQDAKEDPPKVVPGSEISFFKNGVCQGVAFKDLFGGRYYPAASMYTLPNEPNCTVKFNFGPDFDCFPEDFNERPIPKPMIEVPHHGFDNRVENGESNANKSNGELNEKKSIGEVNEKKSNGELNEKKPNEEPNEKKPNEEPNEKKPNEELNEKKPNEEPNEKKPDEEPNEKKPDEEPNEKKPDEELNEKKPNEEPNEKKPNEEPNEKKPNEEPNEKKPDEELNEKKPDEEPNVKKPDEELNEKKPNEEPNVKKPDEERKEKKPNEDSEEKKSNEESEEMES 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02403 628 Coils Coil 611 628 - -
Trre7g02403 628 ProSiteProfiles B30.2/SPRY domain profile. 193 411 IPR001870 -
Trre7g02403 628 MobiDBLite consensus disorder prediction 453 628 - -
Trre7g02403 628 MobiDBLite consensus disorder prediction 174 193 - -
Trre7g02403 628 MobiDBLite consensus disorder prediction 87 107 - -
Trre7g02403 628 SMART SPRY_3 250 410 IPR003877 GO:0005515
Trre7g02403 628 PANTHER SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2 18 446 IPR037353 GO:0048188|GO:0051568
Trre7g02403 628 MobiDBLite consensus disorder prediction 423 628 - -
Trre7g02403 628 FunFam Protein TRAUCO 212 424 - -
Trre7g02403 628 CDD SPRY_Ash2 224 410 - -
Trre7g02403 628 MobiDBLite consensus disorder prediction 20 57 - -
Trre7g02403 628 MobiDBLite consensus disorder prediction 131 163 - -
Trre7g02403 628 MobiDBLite consensus disorder prediction 423 438 - -
Trre7g02403 628 MobiDBLite consensus disorder prediction 1 193 - -
Trre7g02403 628 Gene3D - 211 424 IPR043136 -
Trre7g02403 628 SUPERFAMILY Concanavalin A-like lectins/glucanases 212 414 IPR013320 -
Trre7g02403 628 Pfam SPRY domain 253 328 IPR003877 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02403 Trre-Chr7 19605214 19609283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02403 K14964 - gmx:100816796 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02403 7 19605214 19609283 Trre7g02403 7 19605214 19609283 ECH