Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02400 ATGGCTTCTGTAGTTGTTCCACTACTTCTTCATAACATCCCCAACCAACATTCCAAACCTATGTTTTCATCAAGATCCACTCATCACAAATCCAAACTCTTCTTCCTTTCAAAAAACACTAATAATTCACCAGTATTATTCCTCAAACGCTCTTCTTCTTTGTCCAGATCGTCCACTCTGGACGAATTAAAAGAAGAAGAACACGATGCTGAGGAAGAAGAATCGACACCACCTCCGTTGAGCGAAGTATGGAGGGAAATCCAAGGCGAGAACAACTGGGAAGGGCTATTAGATCCAATGGATTCAAACCTACGAAAAGAAATAATTCGCTATGGAGAACTCGCTCAAGCATGCTACGATTCGTTCGACTTTGATCCACACTCGAAATACTGTGGAACATGCAAGTATCATCCTTCACATTTCTTTGAGAAATTGGACATGCCAGATTGTAGTGGATACACCATAAGCAGGTACCTCTATGCAACATCAGATATCAATCTTCCTAACTTCTTTCAGAAATCAAAGATCTCAGATGTTTGGAGTACACATGCTAATTGGATGGGGTACATAGCTGTTGCCACTGATGAACAAGAGATCAAACGTTTAGGACGCCGTGACATAGTTATTGCATGGAGGGGCACAGTGACATACATTGAATGGATATACGACCTAAAAGACATCCTACATGAAGCAAACTTCAAAAACGACCCAACAATCAAAGTAGAATCAGGATTCCATGAATTATACACTAAAAAAGAAGATTCATGCAATTATTGTTCATTCTCAGCTCGTGAACAAGTACTCTCCGAAATAAAACGCCTTATCGAATACTACGAAGAAGAAGAACTTAGCATCACGATCACCGGCCACAGCCTCGGCGCAGCCTTAGCCATACTGAGCGCATATGACATAGCCGAATTAAAACTAAATGTCCGAAAAGATGGCGACCAAACAACTACTATCCCCGTAACGGTTTACTCGTTTGCGGGGCCTAGGGTTGGGAATTTGAGATTTAAAGAAAGGTGTGAGGAGCTTGGTGTTAAAGTTTTGAGAATATTAAATGTTCATGATATGGTTCCAACTGTGCCCGGGTTTATAACAAATGAGAAATTTCAATTTCAAAGGTATATAGATAAATTGGCTTTTCCTTGGAGTTATGCTCATGTTGGAAGTGAAATAAAATTGGATCATAGAGAAAGTCCTTATTTGAAGGAAAATGGTGACATGGGTTGTGCACATAATTTAGAGGTACTATTGCATTTAATGGATGGGTATCATGGTAAAGGGAAAAAATTTAATTTGGTATCAAAAAGGGATATTGCACTTGTGAATAAGAGCTGTAATTTGCTACGGGGTGAGTATGGTGTACCACCATATTGGAGACAAGATGAAAATAAAGGGATGATTAGAAGCAATGATGGAAAGTGGGTTGTGCCTGAACGGCCAAGATTGGAAGCTCATCCACCACATACAGCACATCATCTTCAATTAGTGCTTAAAAATCACATTCTTGTTAATGGTAGCTTTCAATAA 1533 0.3947 MASVVVPLLLHNIPNQHSKPMFSSRSTHHKSKLFFLSKNTNNSPVLFLKRSSSLSRSSTLDELKEEEHDAEEEESTPPPLSEVWREIQGENNWEGLLDPMDSNLRKEIIRYGELAQACYDSFDFDPHSKYCGTCKYHPSHFFEKLDMPDCSGYTISRYLYATSDINLPNFFQKSKISDVWSTHANWMGYIAVATDEQEIKRLGRRDIVIAWRGTVTYIEWIYDLKDILHEANFKNDPTIKVESGFHELYTKKEDSCNYCSFSAREQVLSEIKRLIEYYEEEELSITITGHSLGAALAILSAYDIAELKLNVRKDGDQTTTIPVTVYSFAGPRVGNLRFKERCEELGVKVLRILNVHDMVPTVPGFITNEKFQFQRYIDKLAFPWSYAHVGSEIKLDHRESPYLKENGDMGCAHNLEVLLHLMDGYHGKGKKFNLVSKRDIALVNKSCNLLRGEYGVPPYWRQDENKGMIRSNDGKWVVPERPRLEAHPPHTAHHLQLVLKNHILVNGSFQ 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02400 510 FunFam Phospholipase A1-II 3 83 488 - -
Trre7g02400 510 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 26 482 - -
Trre7g02400 510 MobiDBLite consensus disorder prediction 58 82 - -
Trre7g02400 510 CDD Lipase_3 158 398 - -
Trre7g02400 510 Gene3D alpha/beta hydrolase 83 488 IPR029058 -
Trre7g02400 510 Pfam Lipase (class 3) 208 365 IPR002921 GO:0006629
Trre7g02400 510 SUPERFAMILY alpha/beta-Hydrolases 101 426 IPR029058 -
Trre7g02400 510 Coils Coil 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02400 Trre-Chr7 19523019 19525951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02400 80 499 Acyl Lipid Metabolism Gene Families AT1G51440 72.093 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02400 - - tpra:123917669 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02400 7 19523019 19525951 Trre7g02400 7 19523019 19525951 ECH