Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02384 ATGACGACGTCGTTTTCATCAGCCGCGCTCAGAGACCCCAAACTTCAGATCCCTACCTACCACACTCTCAGCTCTTTATCCGCCGCCACCTCTCTCAATCGCAATGCTCTCTCTATCCCTTCCTCCACTCGCTCCTCCACTCTCATCATACGCGCTGTTTCCACGCCTGCAAAGACTGAAACTGCAACTGAACAAAAGAGGAGTAAAGTTGAGATATTCAAAGAACAAAGTAATTTTATAAGATATCCTTTAAATGAGGATATGTTAAATGATGCACCTAATTTAAGCGAAGCTGCGACACAATTGATTAAGTTTCATGGAAGTTATCAACAGTATAATAGAGATGAGCGTGGTTCGAGGACTTATTCGTTTATGATACGAACTAAGAATCCTTGTGGTAAAGTTTCAAATCAACTTTACTTGACTATGGATGATCTTGCTGATCAATTTGGAATTGGGACGCTTCGTTTGACTACTAGACAGACGTTTCAGCTTCATGGTGTTGTTAAGAACGATCTTAAACATGTAATGGCTACTATTATTAGAAATATGGGGTCGAGTCTCGGTGCTTGTGGTGATTTGAATAGAAATGTGCTTGCTCCTGCTGCTCCCATTTTGAGGAAAGATTATCTCTTTGCTCAAGAAACTGCGGAGAATATTGCTGCACTTTTGGCTCCTCAGTCTGGTTTTTACTATGATGTTTGGGTAGATGGAGAGAGAATTATGTCAGCGGAATCGCCTGAGGTAGTTCAGGCGCGAAATGACAATTCTCACGGTACAAACTTCACTGATTCGCCTGAGCCCATTTATGGAACTCAGTTCTTGCCGAGGAAATTCAAAATTGCAGTTACCGTGCCGACTGATAACTCTGTGGATATTCTCACAAATGATATCGGTGTTGTTGTTGTTACCGATGATAATGGAGAACCTCAAGGATTCAACTTATATGTTGGTGGGGGGATGGGAAGAACACATAGGCAGGAATCCACTTTCCCCCGATTGGCTGAACCATTGGGTTACGTGCCAAAAGAGGATATTTTGTATGCAGTGAAAGCAATTGTTGTCACACAACGAGAAAATGGGAGAAGAGATGACCGCAAGTATAGTAGAATGAAATATCTGATCGACTCTTGGGGAATAGAGAAGTTCAGAACTGTAGTTGAGGAATATTATGGCAAGAAGTTTGAACCTTTCCGCAGTTTGCCCGAATGGGAATTCAAAAGTTATCTTGGATGGCATCAGCAGGGTGATGGTGGTTTATTCTGTGGGCTTCATGTAGACAATGGTCGTATTGGTGGAAAAATGAAAACAGCACTGAGGGAGGTTATTGAGAAGTATCATTTGAATGTTAGGTTAACTCCAAATCAGAACATCATATTGACTGATATTCGTGCTGCATGGAAACGCCCCATCACAACCATTCTTTCTCAGGCTGGTCTGCTGCAACCAAAATATGTAGATCCCCTTAATGTAACGGCAATGGCATGCCCGGCTTTCCCATTATGTCCCCTGGCAATTACCGAAGCTGAACGTGGGATACCAAGTATTCTTAAGCGTATTCGTGACATGTTTGAGAAGGTTGGTCTGAAGTATAACGAATCCGTAGTTGTAAGGATAACTGGCTGCCCTAATGGTTGTGCTAGACCTTATATGGCTGAACTTGGACTGGTTGGTGACGGCCCAAATAGCTATCAGATTTGGCTTGGAGGCAGCAGTAACCAAACATCATTAGCTCGAACTTTCATGGACAAGGTGAAGCTTCATGACCTTGAAAAGGTTTTGGAGCCATTGTTTTATCACTGGAAGCAAAAGCGTCAATCTAAAGAATCATTTGGCAACTTCACATCCCGACTGGGATTTGAGAAGCTTAAAGAATTTATTGAGAAATGGGAGGGTCCAGTAGTAGCACAAACAACACGCCACAACCTTAAGCTTTTTACCGATAAAGAGACATACGAAGCTATGGATGGGTTAGCTAAACTTCAAAACAAGAATGCTCATCAGTTGGCCATGGAAGTTATCCGCAATTATGTTGCTTCCAACCAAAATGGAAAAGGTGAATCATTTAATTGA 2073 0.4221 MTTSFSSAALRDPKLQIPTYHTLSSLSAATSLNRNALSIPSSTRSSTLIIRAVSTPAKTETATEQKRSKVEIFKEQSNFIRYPLNEDMLNDAPNLSEAATQLIKFHGSYQQYNRDERGSRTYSFMIRTKNPCGKVSNQLYLTMDDLADQFGIGTLRLTTRQTFQLHGVVKNDLKHVMATIIRNMGSSLGACGDLNRNVLAPAAPILRKDYLFAQETAENIAALLAPQSGFYYDVWVDGERIMSAESPEVVQARNDNSHGTNFTDSPEPIYGTQFLPRKFKIAVTVPTDNSVDILTNDIGVVVVTDDNGEPQGFNLYVGGGMGRTHRQESTFPRLAEPLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLIDSWGIEKFRTVVEEYYGKKFEPFRSLPEWEFKSYLGWHQQGDGGLFCGLHVDNGRIGGKMKTALREVIEKYHLNVRLTPNQNIILTDIRAAWKRPITTILSQAGLLQPKYVDPLNVTAMACPAFPLCPLAITEAERGIPSILKRIRDMFEKVGLKYNESVVVRITGCPNGCARPYMAELGLVGDGPNSYQIWLGGSSNQTSLARTFMDKVKLHDLEKVLEPLFYHWKQKRQSKESFGNFTSRLGFEKLKEFIEKWEGPVVAQTTRHNLKLFTDKETYEAMDGLAKLQNKNAHQLAMEVIRNYVASNQNGKGESFN 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02384 690 FunFam Sulfite reductase [ferredoxin], chloroplastic 191 400 - -
Trre7g02384 690 Gene3D Sulfite Reductase Hemoprotein;Domain 2 122 195 - -
Trre7g02384 690 Gene3D Sulfite Reductase Hemoprotein;Domain 2 399 483 - -
Trre7g02384 690 Gene3D Sulfite Reductase Hemoprotein, domain 1 196 398 IPR045854 -
Trre7g02384 690 SUPERFAMILY Nitrite/Sulfite reductase N-terminal domain-like 63 191 IPR036136 GO:0016491
Trre7g02384 690 Pfam Nitrite and sulphite reductase 4Fe-4S domain 491 629 IPR006067 GO:0016491|GO:0020037|GO:0051536
Trre7g02384 690 PRINTS Sirohaem Fe-binding site signature 540 558 IPR006066 GO:0016491|GO:0020037|GO:0051536
Trre7g02384 690 PRINTS Sirohaem Fe-binding site signature 491 509 IPR006066 GO:0016491|GO:0020037|GO:0051536
Trre7g02384 690 SUPERFAMILY Nitrite/Sulfite reductase N-terminal domain-like 410 483 IPR036136 GO:0016491
Trre7g02384 690 SUPERFAMILY Nitrite and sulphite reductase 4Fe-4S domain-like 489 635 IPR045854 -
Trre7g02384 690 Pfam Nitrite/Sulfite reductase ferredoxin-like half domain 413 466 IPR005117 GO:0016491
Trre7g02384 690 Pfam Nitrite/Sulfite reductase ferredoxin-like half domain 121 179 IPR005117 GO:0016491
Trre7g02384 690 NCBIfam sulfite reductase, ferredoxin dependent 61 630 IPR011787 GO:0020037|GO:0050311|GO:0051539
Trre7g02384 690 Pfam Nitrite and sulphite reductase 4Fe-4S domain 217 395 IPR006067 GO:0016491|GO:0020037|GO:0051536
Trre7g02384 690 Gene3D Sulfite Reductase Hemoprotein, domain 1 487 634 IPR045854 -
Trre7g02384 690 SUPERFAMILY Nitrite and sulphite reductase 4Fe-4S domain-like 192 407 IPR045854 -
Trre7g02384 690 PANTHER SULFITE REDUCTASE [NADPH] SUBUNIT BETA-RELATED 30 635 IPR045169 GO:0016491|GO:0020037|GO:0051536
Trre7g02384 690 ProSitePatterns Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 540 556 IPR006066 GO:0016491|GO:0020037|GO:0051536
Trre7g02384 690 FunFam Sulfite reductase [ferredoxin], chloroplastic 400 483 - -
Trre7g02384 690 FunFam Sulfite reductase [ferredoxin], chloroplastic 487 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02384 Trre-Chr7 19392338 19396300 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02384 K00392 - gmx:547693 1202.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02384 7 19392338 19396300 Trre7g02384 7 19392338 19396300 ECH