Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02348 ATGAGTGAGAATTTGAAGGGAAAAGTCAACGCCATTGGAGAGCGTCTTAAAATCAATGGAGCTGAAATGGGAAGAAAGATGAGTGCTGGAATGAGTACTATGAGTTTCAAGATGAAAGAGTTTTTCCAAGAACCAAACCAAGCTGATAAACTTGTTGCTGATGCTACTTCTGACTCACTTGATTACACTAATTGGGATATCATTCTTCATCTTTGTGATTTGATCAATGATGAAAAAATTGATACTTGTGATGTTGTACGTGCCATAAAGAAAAGGGTTATGATGAAAAGTCCTAGAGGTCAGTATTTGGCTTTGGTTTTGCTTGAAATGTTGGTAAAAAATTGTGATAAGGGTTTCTTTGAGGTTGCTACTGAGAGAGTTCTTGATGAAATGGTTAAGATTGTTGATGATCCTGATCAGAGTTTTGTTGCTAGTAAGGAAAAGGCTTTAATCATGATTCGCGATTGGGGAGAATCGACTACTGAGCTTCGATATCTCCCTGTTTATGAAGAAACTTACAAGAGTTTGAAATCAAGGGGCATTAGGTTCCCCGATCGTTACAATTATGAAAGCAAGGTTCCAGTTTCTACTCCTTCTAGCTCTGTTTCTGCACCTGTGGCTGATCTCAGTCTTGAATATCTTATTCACCATGATACTCAGCCTGATATAAGTCTTGCAAAAATTATTCAGCGCGAAAATCTTGTGCCAAGTTTCACATCTCAACAAATAAAGGAAGCATTTGTTGTTGCAAGAAATATCATTCACCTTCTCACTTCCTTGTTGCACAAAGATACTCTCAAGCAAGATTTGACCATCACATTACTACAACAATGTCGCAAGTCCCAAGCTACAGTCCACAAAATCATCGAGACAGTTGGGAATAATGAAGCACTGCTTTTTGAGGCCTTGAATGTAAATGATGAGATTCATAAGGTTCTCTCCAAATATGAAGAGTTAAAGAAGAAGCCTAAAGTTTCTCCGCTTGAACCAGAACCGAATACGATGATACCTGTTGCTATTGAGCCAGATGAGTCACCTCATTTTAGAGAAGAGACCTTGATTAGAAAACCAGCTTGTTCAAGAACTGGAGTTCAAGGATTGAGCCATGATGACATGATGGATGATCTTGATGAAATGATTTTTGGCAAAAAAGGTGGCGATGCATCTCAATGGGGACAAGATCCTAAGAACCAACAACAATCATCAAAATATGACTTCATTTCATTATAA 1230 0.3805 MSENLKGKVNAIGERLKINGAEMGRKMSAGMSTMSFKMKEFFQEPNQADKLVADATSDSLDYTNWDIILHLCDLINDEKIDTCDVVRAIKKRVMMKSPRGQYLALVLLEMLVKNCDKGFFEVATERVLDEMVKIVDDPDQSFVASKEKALIMIRDWGESTTELRYLPVYEETYKSLKSRGIRFPDRYNYESKVPVSTPSSSVSAPVADLSLEYLIHHDTQPDISLAKIIQRENLVPSFTSQQIKEAFVVARNIIHLLTSLLHKDTLKQDLTITLLQQCRKSQATVHKIIETVGNNEALLFEALNVNDEIHKVLSKYEELKKKPKVSPLEPEPNTMIPVAIEPDESPHFREETLIRKPACSRTGVQGLSHDDMMDDLDEMIFGKKGGDASQWGQDPKNQQQSSKYDFISL 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02348 409 CDD VHS 48 178 - -
Trre7g02348 409 PANTHER TOM1-LIKE PROTEIN 1 1 407 IPR044836 GO:0035091|GO:0043130|GO:0043328
Trre7g02348 409 Coils Coil 302 322 - -
Trre7g02348 409 SUPERFAMILY GAT-like domain 219 321 - -
Trre7g02348 409 MobiDBLite consensus disorder prediction 380 409 - -
Trre7g02348 409 Gene3D - 39 202 IPR008942 -
Trre7g02348 409 MobiDBLite consensus disorder prediction 391 409 - -
Trre7g02348 409 Gene3D - 241 328 IPR038425 -
Trre7g02348 409 SMART VHS_2 48 180 IPR002014 GO:0035091|GO:0043130
Trre7g02348 409 Pfam GAT domain 256 321 IPR004152 GO:0035091|GO:0043130
Trre7g02348 409 SUPERFAMILY ENTH/VHS domain 42 184 IPR008942 -
Trre7g02348 409 Pfam VHS domain 46 180 IPR002014 GO:0035091|GO:0043130
Trre7g02348 409 ProSiteProfiles GAT domain profile. 234 321 IPR004152 GO:0035091|GO:0043130
Trre7g02348 409 ProSiteProfiles VHS domain profile. 55 184 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02348 Trre-Chr7 19055918 19058189 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02348 - - ccaj:109799203 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02348 7 19055918 19058189 Trre7g02348 7 19055918 19058189 ECH