LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre7g02335	ATGGCTTCAAAATCTACTACTAGTTCTAGATCAAAACTATCTGAGAATTCGAACAAAGCATCACAGGCGACGCCAAGAGTTAGTAAAGTTAGCAAAGTAGTGTCGAAATCAGAATCTGATTCGCCGTCTCCCTTGCAAAGTTCGCGTACTCCTGTGGAGAGATCACCGCGATCTGTGAATTCAAAGCCTGCAATTGAGCGGAAATCAGCCAAAGCTACCTCTACTCCCCCTGATAAACAAGTTCCGAGAGCTGCAAAGGGTTCAGAATTGCAGAACCAGTTAAATGTAGCTCAAGAAGATCTAAAGAAAGCAAAGGAGCAGATCCTTCAGGCTGAGAAGGAGAAGGTAAAAGCTATTGATGAGTTGAAAGAAGCACAGAGAGTGGCCGAGGAAGCAAATGAGAAGCTCAAGGAAGCATTAGCGGCTCAAAAGCAGGCTAAGGAGGAATCTGAGATTGAAAAATTCCGATCTGTTGAATTGGAACAGGCTGGAATTGAAACTGTGAAGAAGAAGGAAGAAGAATGGCAGAAAGAGCTTGAAAGTGTGAGGAACCAGCATGCCTTGGATGTGGCTGCTCTTGCATCCACGGCCGAGGAGCTTCAGCGGGTTAAACAAGAACTCACCACGACTTGTGATGCTAAGAACGAGGCATTGAATCATGCTGATGATGCAGCTAAAATTGCTGAGGTTCATGCTGAGAAAGCAGAAACTTATGCAGCTGAATTGACGCAATTGAAGGCCTTATTAGATTCAAAAGAAGAAACAAAAGCTAGTGATAATAACCTTATATTGAAGTTGAAAGCAGAGATAGAAGCTCTCAAGCAAGAACTCAATAAGGGAATGAGTTATGATGAGAAGTTAACAGAGAAAGAAACTAAGATTGAACAGCTTAATGTAGAACTTGAAACCTCAAGGATGGCTGAATCTTATGCTCATAGTCTGCTAGAAGAATGGAAGAAGAAGGTTGAGGAACTAGAAATGAAGGTTGAAGAGTCAAACAGATTGGAGCGATCTGCATCAGAATCTTTGGAATCTGTAATGAAACAGCTAGAAGAAAGCAATGATTTGTTGCATGATTCAGAATCTGTAGTTTCTTCTCTTAAAGAGAAGGTGGGATTGTTAGAAATGACAATTGCGAGGCAAAAAGCCGATGTTGAGGATTCTGAACGTCGCCTTCTTGCGGTTAACGAAGAAAATCTTGATCTTTCCAAGAAGGTCGAGTCTCTCAAATCTGAACTTGAGACGGTGAAGGAAGAGAAAGATCAGGCTTTGAACAATGAACACCTTGCAGCCTCTAGTGTGCAGACTCTTCTAGAAGAGAAAAACAAACTTATCAATGAATTGGAGAATGCTAGGGAAGAAGAAGAAAAAAGTAAAAAGGCAATGGAAAGCTTAGCTTCTGCATTACATGAAGTATCTGCAGAATCTAGAGAAGCTAAAGAGAATTTTCTAATCAACCAAGCTGAAAGGCATAGCTATGAGTCCCAGATTGAAGATTTAAAGTTAGTCTTAAAAGGTACTAATGAAAAATACGAGTCCATGCTTGACGAAGCACGGCATGAAATTGATGTTCTTATATACAGTATTGAAAACTCTAAGAATGTCTTTGAGAACTCGAAGGCTGAGTGGGAGCAGAGAGAGCTTCTTCTAGTCAGCAGCCTGAAGAAAACCGAAGAAGAGAATGCGGCCACGGAAAAAGAAATAAATAGATTGGTTAATTTACTTAAACAAACCGAGGAAGAAGCTAATGCCAACAGGGAGGAAGAAGCTCAGTTGAAGGAAAATCTGAAGGAAGTTGAGACCGAGGCGATCCACCTGCAGGAAGCTCTTAAGGAAGTAACGGCTCAGAACATGAAATTGAAGGAGAGTTTATTGGATAAAGAAAATGAAATGCAGAATGTTTTTCAAGAAAACGATGAACTCCGAGCAAAGGAAGCCGAATCTAATAAGAAGGTGGAGGAGTTGTCTAAGTTGCTGGAAGAAGCTACAGCCAGAAACCATGCCGACCATAAAAATGGCGATCTTTCAGACAGTGAGAAGGACTATGACTTGCTTCCTAAAGTAATTGAATTTTCTGAAGAGAATGGTCATGGATATGGAGGAGAGGAAATTCCAAAGGTTGAATTTTCCTTCAACCAGGAAGAACTCAAACATAGCTTACAAGAACAAAGTACGATCTTGAATGACAAAGCTGATGAGAAAATCGAATCTCCGAAACTTGTCAATGTGAATGGAAAACCAAAGGAAGATGAGAGCAAAGAAAAGGATGGTCCAGAAGAAGTAGAATTCAAAATGTGGGAGAGCTGCACAATAGAGAAAAAAGAGTTCTCATTTTCACCAGAGAGAGAACTTTCACTTCCAGAGGCTGAATCATTTGAAGAGGAAACTGAGTCAAAGATAGAAGAAGGTGATGGTGAGAGCTTTGATAAGATAAATGGAACAACTGTGATAGAGAATATTGATAATGGTGGAAGCTCACCATTGAAAGAACAACAACAACAATTGAAGAAGAAAAAGAAACCTTTGCTTGGAAAATTTGGAAGCTTGCTCAAGAAAAAAGGTGGTAGCAACCAGAAATAG	2580	0.4035	MASKSTTSSRSKLSENSNKASQATPRVSKVSKVVSKSESDSPSPLQSSRTPVERSPRSVNSKPAIERKSAKATSTPPDKQVPRAAKGSELQNQLNVAQEDLKKAKEQILQAEKEKVKAIDELKEAQRVAEEANEKLKEALAAQKQAKEESEIEKFRSVELEQAGIETVKKKEEEWQKELESVRNQHALDVAALASTAEELQRVKQELTTTCDAKNEALNHADDAAKIAEVHAEKAETYAAELTQLKALLDSKEETKASDNNLILKLKAEIEALKQELNKGMSYDEKLTEKETKIEQLNVELETSRMAESYAHSLLEEWKKKVEELEMKVEESNRLERSASESLESVMKQLEESNDLLHDSESVVSSLKEKVGLLEMTIARQKADVEDSERRLLAVNEENLDLSKKVESLKSELETVKEEKDQALNNEHLAASSVQTLLEEKNKLINELENAREEEEKSKKAMESLASALHEVSAESREAKENFLINQAERHSYESQIEDLKLVLKGTNEKYESMLDEARHEIDVLIYSIENSKNVFENSKAEWEQRELLLVSSLKKTEEENAATEKEINRLVNLLKQTEEEANANREEEAQLKENLKEVETEAIHLQEALKEVTAQNMKLKESLLDKENEMQNVFQENDELRAKEAESNKKVEELSKLLEEATARNHADHKNGDLSDSEKDYDLLPKVIEFSEENGHGYGGEEIPKVEFSFNQEELKHSLQEQSTILNDKADEKIESPKLVNVNGKPKEDESKEKDGPEEVEFKMWESCTIEKKEFSFSPERELSLPEAESFEEETESKIEEGDGESFDKINGTTVIENIDNGGSSPLKEQQQQLKKKKKPLLGKFGSLLKKKGGSNQK	859

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre7g02335	859	Coils	Coil	490	517	-	-
	Trre7g02335	859	MobiDBLite	consensus disorder prediction	775	859	-	-
	Trre7g02335	859	Coils	Coil	190	217	-	-
	Trre7g02335	859	Coils	Coil	287	307	-	-
	Trre7g02335	859	Coils	Coil	87	153	-	-
	Trre7g02335	859	PANTHER	SYNAPTONEMAL COMPLEX PROTEIN-RELATED	12	855	-	-
	Trre7g02335	859	Coils	Coil	378	426	-	-
	Trre7g02335	859	MobiDBLite	consensus disorder prediction	1	90	-	-
	Trre7g02335	859	MobiDBLite	consensus disorder prediction	727	763	-	-
	Trre7g02335	859	Coils	Coil	431	482	-	-
	Trre7g02335	859	Coils	Coil	554	665	-	-
	Trre7g02335	859	MobiDBLite	consensus disorder prediction	715	763	-	-
	Trre7g02335	859	Coils	Coil	315	342	-	-
	Trre7g02335	859	Coils	Coil	235	276	-	-
	Trre7g02335	859	MobiDBLite	consensus disorder prediction	775	793	-	-
	Trre7g02335	859	MobiDBLite	consensus disorder prediction	656	679	-	-
	Trre7g02335	859	Coils	Coil	165	185	-	-
	Trre7g02335	859	MobiDBLite	consensus disorder prediction	1	57	-	-
	Trre7g02335	859	MobiDBLite	consensus disorder prediction	812	831	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre7g02335	Trre-Chr7	18948084	18951915	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre7g02335	-		-	gmx:100777446	1028.47

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Trre7g02335	7	18948084	18951915	Trre7g02335	7	18948084	18951915	ECH