Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02321 ATGAAGGTTCCAAAGGTTCCTGGGGGTGGTGGACTCTCTGCTTTGCTTAAAGTTAGTATTATTGGTGGACTTGCTGTATATGGAGCTACAAACACTTTGTACAATGTTGAGGGTGGTCACCGTGCTATTGTCTTTAACCGTCTTGTTGGTGTCAAAGATAAGGTCTATCCTGAAGGAACACATATTATGATCCCGTGGTTTGAGAGGCCTGTGATCTATGATGTACGTGCACGACCTCATTTAGTGGAGAGCACTTCAGGAAGCCGTGATCTCCAAATGGTGAAAATTGGACTTAGAGTTCTTACTCGTCCCGTGCCAGAGCAACTACCGACAGTTTATCGTACTCTCGGTGAGAATTATAATGAAAGGGTCCTGCCATCTATCATACACGAAACTCTCAAAGCTGTGGTTGCACAGTACAACGCCAGTCAGCTCATTACTCAGAGAGAGGCTGTTAGTCGAGAGATAAGGAAGATATTGACTGAAAGGGCTTCCCAATTCAACATTGCATTGGATGATGTGTCAATCACAAGTTTGACATTCGGGAGGGAATTCACAGCTGCAATTGAAGCCAAGCAGGTTGCTGCTCAAGAAGCTGAGAGAGCGAAATTTGTTGTGGAAAAAGCTGAACAAGACAAAAGAAGTGCTGTTATTAGAGCACAGGGAGAAGCCAAGAGTGCTCAATTGATTGGTCAAGCTATTGCCAACAACCCTGCTTTTATAACCTTGAGGAAAATTGAAGCTGCTAGGGAAATCGCTCAAACAATTTCAAATTCTGCCAACAAGGTTTACCTGAATTCAAATGATCTCTTGTTGAATCTTCAGGATTTAAATTTGGAGCCGAGTGGGAAGAAATAG 858 0.4324 MKVPKVPGGGGLSALLKVSIIGGLAVYGATNTLYNVEGGHRAIVFNRLVGVKDKVYPEGTHIMIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVPEQLPTVYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERASQFNIALDDVSITSLTFGREFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAIANNPAFITLRKIEAAREIAQTISNSANKVYLNSNDLLLNLQDLNLEPSGKK 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02321 285 PANTHER PROHIBITIN 2 280 IPR000163 GO:0016020
Trre7g02321 285 PRINTS Prohibitin signature 94 113 IPR000163 GO:0016020
Trre7g02321 285 PRINTS Prohibitin signature 188 211 IPR000163 GO:0016020
Trre7g02321 285 PRINTS Prohibitin signature 211 227 IPR000163 GO:0016020
Trre7g02321 285 PRINTS Prohibitin signature 140 156 IPR000163 GO:0016020
Trre7g02321 285 PRINTS Prohibitin signature 117 135 IPR000163 GO:0016020
Trre7g02321 285 PRINTS Prohibitin signature 163 182 IPR000163 GO:0016020
Trre7g02321 285 PRINTS Prohibitin signature 76 92 IPR000163 GO:0016020
Trre7g02321 285 Coils Coil 192 212 - -
Trre7g02321 285 CDD SPFH_prohibitin 33 227 IPR000163 GO:0016020
Trre7g02321 285 FunFam Prohibitin 2 61 195 - -
Trre7g02321 285 Gene3D Band 7 domain 61 195 IPR036013 -
Trre7g02321 285 Pfam SPFH domain / Band 7 family 35 210 IPR001107 -
Trre7g02321 285 SUPERFAMILY Band 7/SPFH domain 64 200 IPR036013 -
Trre7g02321 285 SMART PHB_4 32 193 IPR001107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02321 Trre-Chr7 18821465 18825466 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02321 K17081 - gmx:100811958 498.434