Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02317 ATGGCTGGAAATGGTTTATTTTATCCAATATTTGGTTTTGCATCGGTTGTGCTTTTAATTTACATGTCATTTGGGGATGTAAGGATGGGTTTTGAGGAAGAAATAGAATTGAGTTTTGTGGAGAGAAAGGGTTCTCAGTTTGTGTTGGATGGAAAAGCTTTTTATATTAATGGTTGGAACTCTTATTGGTTTATGGTTCAATCTGTTGATGTTTATACAAGACCTAGAGTAAGTGAAATGCTGAAAATTGGGGCTAAAATGGGTCTAACTGTTTGTAGAACTTGGGCTTTTAATGATGGTGACTATAATGCCCTTCAGACTTCACCTGGTGTTTTTAATGAGCAAGCTTTCAAGGCCTTGGACTATGTCATAGCAGAAGCAAGGAGACATCGAATTCGGCTACTTCTCACCTTAGTAAATAACTTGCAAGCATATGGTGGAAAAGATCAGTATGTGAAGTGGGCATGGCAAGAAGGGACAGGTTTAAGCTCATCTAATGATTCTTTCTTCTATGATCCATCAATCCGAAGTTATTACAAAACTTATGTCAAGACTATTTTGACAAGGAAGAATACTATTACTGGAATTGAATATAGACACGACCCTATCATTTTTGGTTGGGAATTGATTAATGAGCCGCGATGTGCAACTGATCCTTCTGGTGACACTCTCCAAGATTGGATAGAGGAAATGTCAACTTTTGTCAAATCGATCGACAAGAAACATTTGGTTACTATTGGACTCGAAGGTTTTTATGGTCCTAATGACCCAAAAAGGTTGACTGTCAATCCACCAGAAGGGTGGGCGTCGCTGCTTGGATCTGATTTTATTAGGAACTCCCGGACCTCTAATATTGACTTCACCTCTGTCCATATCTATCCTGACCATTGGTTTCATAAGCAAGTTTTTGACGACTACATGAAATTCCTGTCGAAATGGATGCTTTCTCACATTGAAGATGGTGATAATGTATTAAACAAACCTGTTTTGTTTTCTGAATTTGGATTATCAGACTCAATCAAGAACTATTCAATGTCTAACCGAGAAAAGATGTACAAAACAATTTTAGACATATCCCACAAATCTGCCAAGAACAATCGGTCCGGAGCAGGTGCTATGGTTTGGCAGTTCTTAGTCGGTGGAATGTCGGATTTCATCGATGATTTTGGGATGGTACCGTGGGAAAAGCCATCAATCTATTCAATGTTTACTCAACATTCATGCAGATTATCGAAGGTCAACAAAGGATTGACTCAACAGAACCCAAGTTTCAAACAAGTGTGTTAG 1287 0.3846 MAGNGLFYPIFGFASVVLLIYMSFGDVRMGFEEEIELSFVERKGSQFVLDGKAFYINGWNSYWFMVQSVDVYTRPRVSEMLKIGAKMGLTVCRTWAFNDGDYNALQTSPGVFNEQAFKALDYVIAEARRHRIRLLLTLVNNLQAYGGKDQYVKWAWQEGTGLSSSNDSFFYDPSIRSYYKTYVKTILTRKNTITGIEYRHDPIIFGWELINEPRCATDPSGDTLQDWIEEMSTFVKSIDKKHLVTIGLEGFYGPNDPKRLTVNPPEGWASLLGSDFIRNSRTSNIDFTSVHIYPDHWFHKQVFDDYMKFLSKWMLSHIEDGDNVLNKPVLFSEFGLSDSIKNYSMSNREKMYKTILDISHKSAKNNRSGAGAMVWQFLVGGMSDFIDDFGMVPWEKPSIYSMFTQHSCRLSKVNKGLTQQNPSFKQVC 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02317 428 Gene3D Glycosidases 36 414 - -
Trre7g02317 428 FunFam Mannan endo-1,4-beta-mannosidase 6 36 414 - -
Trre7g02317 428 Pfam Cellulase (glycosyl hydrolase family 5) 63 376 IPR001547 GO:0004553|GO:0071704
Trre7g02317 428 PANTHER - 11 423 IPR045053 GO:0004553
Trre7g02317 428 SUPERFAMILY (Trans)glycosidases 38 394 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02317 Trre-Chr7 18778008 18780783 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02317 2 413 Glycoside Hydrolase AT2G20680 67.718 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02317 K19355 - gmx:100806003 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02317 7 18778008 18780783 Trre7g02317 7 18778008 18780783 ECH