Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02188 ATGGGTGGTCAACAACAGCACAAAAAGTCTAAGGTTGTGAAAATTGACTCAATGAAATCATGGGAACACAACATCATTGAAGCTACCAAAAAAGGTTACCTTGTTATGGTTCATTTCTCTGCTTATTGGTGTATGCCTTCTGTTGCTATGGACCTTTTCTTTGAAGAGCTGGCTTCCACCAATCAAGATGTCCTTTTTCTGAAGGTGGATGTGGACGAAGTTAAGGAAATAGCCTCCAAAATGGAAATCAATGCCATGCCTACCTTTTTATTGATGAGTGGAGGAACTCTGGTGGATAGAGCTGTTGGTGCAAATCCTGATGAAGTAAGGAAAAGGATGGACCATTTTATTCACCAAACAAATTCCTCCAAATCATTATCAATATGA 387 0.3928 MGGQQQHKKSKVVKIDSMKSWEHNIIEATKKGYLVMVHFSAYWCMPSVAMDLFFEELASTNQDVLFLKVDVDEVKEIASKMEINAMPTFLLMSGGTLVDRAVGANPDEVRKRMDHFIHQTNSSKSLSI 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02188 128 Gene3D Glutaredoxin 2 125 - -
Trre7g02188 128 CDD TRX_family 27 114 - -
Trre7g02188 128 SUPERFAMILY Thioredoxin-like 9 118 IPR036249 -
Trre7g02188 128 ProSiteProfiles Thioredoxin domain profile. 1 118 IPR013766 -
Trre7g02188 128 Pfam Thioredoxin 17 113 IPR013766 -
Trre7g02188 128 PANTHER THIOREDOXIN 12 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02188 Trre-Chr7 17387395 17389222 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02188 K03671 - gmx:100500083 189.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02188 7 17387395 17389222 Trre7g02188 7 17387395 17389222 ECH
Trre11g03566 11 48877752 48879481 Trre7g02188 7 17387395 17389222 PCT