Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02164 ATGCGTGCCCCTACCGTCAGAAAACTATGCACTCTCAGCACGTTATTCCGTTCCCATGTACAAAACAATCCCAAAAAAAACCCTTCTTCCATCATTACATCAATTCCAAGTGAAACCCAACAACATTTTCAGTCTGAATTGTATCTCTCAACCCTCAAACTCCATGGTCCTTCTCCTCCAGAGGATTTGCCTGATCTCGACTTCGATCCTGCCACTGCTCAGCTTTCTAATATATTGTACACTCCTCCGGTGGAGAAGCTTGGTTGTGAGGGAGTTGATGATCACGAAAAAGAGAAAAATGTATTGGAAATACCAACTATACGAGACTCTTTAAATGTTGATGCTTCAATGAGACGGAAGGATGTAGGACGTGAGAGGAAACAAAAATGGATTTTCAAATATACTGGTGATGAACGATCTGACAGGTTAATGAATATCTGTGCAAAAAAACTAGGAACAACTGCTACTGTTGATGTATTTGGCCGCTTGGGTCGAGAAACGGGTCTTAAAGAGTACAATGGATTGATCAAAGTGTGCATAAAGAAGGCTAGGGCGACTAATGATGAAAACATTTCTATGGAAGAAATAAGTAAGAGTTATTACCTTTTAAAATTAATGAGGGAATGCGGGTTCCAGCTAGAAGAGCAAACATATCGCCCAGTTCTTGAGTATATAACTGACATGGGCCTTGTTCAAGAATTTCAACTTTTCTATGATGTTATCCAAGCCAGTAATCCCAGTTCAATTTCACGATTGGGTTACTATGAGATGTTGCTCTGGATAAGGGTTAACAATGAAGAAATGATCCGGGATATTTGTGAATACATTACAGTCGAAGAGGGTAAAGACACTTCTGCTTTACGAGAAAGTTACTTATTGGCTCTTTGTGAAAGTGATCGCAAGACACAAATTTTGGACGTGTTGAAAAATATTGACATAACAAAGTTTTCATCTGCAAAATCTATATCAAATATATTTCAATCGCTGGGAAGGTTACTGCTGGAATCAGATGCAGAGAATTTACTTTTGGATTTGACAGCATGTGATTACGATGCAGATCATATTTCAAACTTCATTGCTTGTTATGCAGTTAGCATTCCAAATTTAGCGGTCAAGGATATCATCTCAAAAATTGAGAATTTGCATGATGTATTGGAAGTTTTGCCTTCATCTTCTGCATATGAAAAGCTCATTTCGTATTGCTGTGGTACGTACAAGGTGGATGTAGCACTTGATATTGTTGAAAAAATGTGTGAAGCAGGCTTTAAGCCATCTATTCACGTGTTACAAACCATAATACAGATTTGTGAGGAAACTTATGATTATATTTTGGTTCATCGAATCTATTCCATCATAAGATGCCATCACCACAACTTGGACTTAAATGGTGAAATATGCAGGTGTTTGGTACAGTTTTGTGTAAGAATAAAAGATTTTCAACGTGCATACGAGATGGTTAGTGAATTGAAGGAAATGAATTTCAAAGTTACGACAGCCATGTACAATGCCATAATGGCAGGATATTTTCGCGAGAAAAACATCAGCGGTGCGTTGAAGGTCCTAAAACACATACAAGATGCCAATTTAAAGCCTGATTCACAGACTTTCAGCTATTTGTTCACCAATTGTGAAAAACAAGAGGATATAAATAAGTATTATGAAGAGATGAAACAATCTGGAACCGCCCCTACAAAACAAATTTTTATGGCCCTTATTAATGGATATGCAGCCTGCGGCGAATTGGAGAAGGCAAAACAGGTAGTTCTTGATCCAGGCATACCGTTGAAGTACTTAAATGAAATTAAGAGTGTCCTTGTCTCAGCTCTTGCATCTCATGGACAATTGTTTGAGGCAATTGCTATCTATAATGAGATGAAGAATGCTGGACACCATTTGGAGCCAAAAGCTGTTATATGTCTCATTGATGAGCTGCGTCTTATAAGTGGAGAGTTAGAGGGTTTGCTTCGTCTACTTAACGAGTTGAGTGATCTAGACTATTGGGTTGACGGTTGCTATAGGGTTATCCAGTTCTGTGTTGAGAACAATCATTTAAGTACTGCTGTTGACCTGTTCAAGCAACTCAAGGATCATTTCAAAAATGATGAAATAATGACAGAAGTTCTTTTCGATGGAGCGTATGCTGTAATCGCGGGATCCGAGTCCACACATTTGCAGTTTGGTATGGATTTGCTTTGGGCAATCAAGGATGAGCTTGGTCTTGTTCCTTCACGGCAGTGTCTCGATTTTCTTCTAAGCGCTTGTGCCCAGTCAAAAGATTTGAATAACAGTCGTTTGGTTTGGAGAGAATATGAAGTTTGCGGATATCCTTACAATGTATTGAGTTACGTGAGGATGTATCAAGCACTTTTGGCATCAGGAGATCACAGATCTGCTGAAGTTACACTCAACAAAATTACAAGAGATGACGCCGAGATTTGTTCTTTAATTTCAGCATGTCAAAAAACTTACACTGTTAAAACTAAATCACTAGAGTGGGAGACGAAGGAAAAGAATATTAAATCAGCAGAAGGGGAGAAGAAGAAAAAGAATGTAAAATCAGTAGAAGTGGAGACGAAGGAAAAGAATATTAAATTAGCAGAAGGGGAGAAGAAGAAAAAGAATGTTACATCTGTGGAAGGGGCGAAGAAGAAAAAGAATGTTACATCAGTGGAATTGGAGAAAAGAAAAAGAATGTTACAACAGTGGAAGATGAAAAAGAAAAAGAAAGCAACAGAAAAGAAGAAAATAGATTAA 2754 0.3809 MRAPTVRKLCTLSTLFRSHVQNNPKKNPSSIITSIPSETQQHFQSELYLSTLKLHGPSPPEDLPDLDFDPATAQLSNILYTPPVEKLGCEGVDDHEKEKNVLEIPTIRDSLNVDASMRRKDVGRERKQKWIFKYTGDERSDRLMNICAKKLGTTATVDVFGRLGRETGLKEYNGLIKVCIKKARATNDENISMEEISKSYYLLKLMRECGFQLEEQTYRPVLEYITDMGLVQEFQLFYDVIQASNPSSISRLGYYEMLLWIRVNNEEMIRDICEYITVEEGKDTSALRESYLLALCESDRKTQILDVLKNIDITKFSSAKSISNIFQSLGRLLLESDAENLLLDLTACDYDADHISNFIACYAVSIPNLAVKDIISKIENLHDVLEVLPSSSAYEKLISYCCGTYKVDVALDIVEKMCEAGFKPSIHVLQTIIQICEETYDYILVHRIYSIIRCHHHNLDLNGEICRCLVQFCVRIKDFQRAYEMVSELKEMNFKVTTAMYNAIMAGYFREKNISGALKVLKHIQDANLKPDSQTFSYLFTNCEKQEDINKYYEEMKQSGTAPTKQIFMALINGYAACGELEKAKQVVLDPGIPLKYLNEIKSVLVSALASHGQLFEAIAIYNEMKNAGHHLEPKAVICLIDELRLISGELEGLLRLLNELSDLDYWVDGCYRVIQFCVENNHLSTAVDLFKQLKDHFKNDEIMTEVLFDGAYAVIAGSESTHLQFGMDLLWAIKDELGLVPSRQCLDFLLSACAQSKDLNNSRLVWREYEVCGYPYNVLSYVRMYQALLASGDHRSAEVTLNKITRDDAEICSLISACQKTYTVKTKSLEWETKEKNIKSAEGEKKKKNVKSVEVETKEKNIKLAEGEKKKKNVTSVEGAKKKKNVTSVELEKRKRMLQQWKMKKKKKATEKKKID 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02164 917 Gene3D Tetratricopeptide repeat domain 139 505 IPR011990 GO:0005515
Trre7g02164 917 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 497 531 IPR002885 -
Trre7g02164 917 Pfam Pentacotripeptide-repeat region of PRORP 392 558 IPR033443 -
Trre7g02164 917 PANTHER OS02G0132600 PROTEIN 6 831 - -
Trre7g02164 917 MobiDBLite consensus disorder prediction 898 917 - -
Trre7g02164 917 Pfam PPR repeat 568 587 IPR002885 -
Trre7g02164 917 Pfam PPR repeat 604 629 IPR002885 -
Trre7g02164 917 MobiDBLite consensus disorder prediction 899 917 - -
Trre7g02164 917 NCBIfam pentatricopeptide repeat 604 630 IPR002885 -
Trre7g02164 917 NCBIfam pentatricopeptide repeat 500 533 IPR002885 -
Trre7g02164 917 NCBIfam pentatricopeptide repeat 393 425 IPR002885 -
Trre7g02164 917 Gene3D Tetratricopeptide repeat domain 506 671 IPR011990 GO:0005515
Trre7g02164 917 Gene3D Tetratricopeptide repeat domain 672 914 IPR011990 GO:0005515
Trre7g02164 917 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 390 424 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02164 Trre-Chr7 17216046 17226537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02164 360 661 Glycosyltransferase AT1G05670 20.755 1.53e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02164 - - tpra:123908063 1536.16