Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02153 ATGCTTTCTGCTAGCAAACTCAAATCTGTTGATTTTTACAGAAAAATCCCAAGAGATTTAACTGAAGCGTCGTTGTCAGGAGCGGGATTATCCATAGTGGCAGCTTTGGCGATGATGTTTTTGTTTGGAATGGAACTTAATAATTATTTTGCTGTCACTACCTCCACATCTGTGATTGTTGACAAGAGTTCTGATGGTGACTTTTTACGTATAGAATTCAATATCAGTTTTCCTGCACTCTCGTGTGAGTTTGCATCAGTTGATGTGAATGACGTGCTGGGAACAAACAGGCTCAATATAACAAAAACAGTTCGTAAGTTTTCTATTGATTCAAATTTAAGACCCACTGGCTCTGAGTTTCATTCGGGAACGAATGCAAATGCTGTTAAGCATGATGATGAAGTAGATGAAGAGTTTGTTGAAGGTGCTTTGCCACTCACGTCACAAAACTTTGATAAATATATTCATCAGTTCCCAATTACAGTTGTAAACTTTTATGCACCTTGGTGTTCCTGGTGCCAACGTTTGAAACCTTCATGGGAGAAGACAGCTATAATAATGAGAGAGAGATATGATCCAGAAATGGATGGACGTATTCTTTTGGCAAAGGTAGATTGCACTCAAGAAGGTGATTTATGCAGGAGGCATCATATACAAGGATATCCGTCTATTCGCATCTTTCGGAAAGGAAGTGATGTCAGAAGTGACCATGGACATCATGAACATGAGTCCTATTATGGAGATCGTGATACAGAAAGCCTAGTCAAGACAATGGAGAGTTTGGTGGCAGATCTCCCAACAGGATCTCAACATCTAGCCTTGGAAGATAAATCCAATGGAACAGGAAATTTAAAAAGACCGGCACCATCAACCGGTGGATGTAGAGTTGAGGGATTTGTGCGTGTGAAAAAGGTTCCAGGAAGCTTGATTGTCTCAGCTAGATCAGATGCACATTCATTTGATGCTTCTCAAATGAACATGTCACATGTCGTAAACCATCTGTCTTTTGGGAAAAAAATAATGGCTAGAGCCATGAGTGATGTGAAGAATTGGATACCATACATAGGTAGCAACCATGACAGGCTGAATGGCAGGTCATTTATCAATACTCGTGATTTGGAAGGAAATGTTACTATTGAGCATTATATCCAGGTAGTCAAAACAGAGGTAATAAGCAGGAAAGGTTATAAATTAATTGAGGAGTACGAGTACACAGCCCACAGCAGTGTAGCACACAGTGTAAACATTCCGGTTGCAAGGTTCCATCTTGAGCTCTCGCCCATGCAGGTCGTAATAACTGAAAACCAGAAGTCTTTTTCACATTTTATTACGAATGTCTGCGCTATTATTGGGGGTGTTTTCACGGTAGCTGGAATTGTTGACTCGATTCTGCATAACACTATTAGGGCAATGAAAAAAATTGAGCTTGGCAAGAATTTTTGA 1443 0.3999 MLSASKLKSVDFYRKIPRDLTEASLSGAGLSIVAALAMMFLFGMELNNYFAVTTSTSVIVDKSSDGDFLRIEFNISFPALSCEFASVDVNDVLGTNRLNITKTVRKFSIDSNLRPTGSEFHSGTNANAVKHDDEVDEEFVEGALPLTSQNFDKYIHQFPITVVNFYAPWCSWCQRLKPSWEKTAIIMRERYDPEMDGRILLAKVDCTQEGDLCRRHHIQGYPSIRIFRKGSDVRSDHGHHEHESYYGDRDTESLVKTMESLVADLPTGSQHLALEDKSNGTGNLKRPAPSTGGCRVEGFVRVKKVPGSLIVSARSDAHSFDASQMNMSHVVNHLSFGKKIMARAMSDVKNWIPYIGSNHDRLNGRSFINTRDLEGNVTIEHYIQVVKTEVISRKGYKLIEEYEYTAHSSVAHSVNIPVARFHLELSPMQVVITENQKSFSHFITNVCAIIGGVFTVAGIVDSILHNTIRAMKKIELGKNF 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02153 480 Pfam Endoplasmic reticulum vesicle transporter 290 461 IPR012936 -
Trre7g02153 480 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 5 479 IPR045888 -
Trre7g02153 480 Pfam Thioredoxin 145 243 IPR013766 -
Trre7g02153 480 ProSiteProfiles Thioredoxin domain profile. 120 263 IPR013766 -
Trre7g02153 480 FunFam Protein disulfide-isomerase 5-4 131 286 - -
Trre7g02153 480 SUPERFAMILY Thioredoxin-like 144 261 IPR036249 -
Trre7g02153 480 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Trre7g02153 480 Gene3D Glutaredoxin 126 279 - -
Trre7g02153 480 CDD PDI_a_family 144 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02153 Trre-Chr7 17110751 17119765 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02153 - - aprc:113860202 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02153 7 17110751 17119765 Trre7g02153 7 17110751 17119765 ECH