Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02150 ATGTCGGAGCGAGACGCAGGTTGGGATTTTCACCTCCGAACGCTATCTATCAGTGCCAGAGATTCTAACATCGCCAACGATCCCGCTTCCGATCCCTCTCTTCTTCAATCTGTGAAAAAGCTTCATGAATTATGCAAAGCCGAGAACAACGAAGATTTGGTAGCTAGGGTTTATCCGCAGATTAATAAGATTTTTCAGCGTGCTGTGGCTTCACTTTCTCAATCTCAAACCTCCAATGGTCTTCTTTTAATCGCGATTCTTCAGTTTTACCTGGACTTTGGGGAGGTTGTTCTTCATGATGCTGATCCTAGTCTCAGGACCTTTTTTCGTTCTTGCTTGAGCAGGGAGTTTGCTGATCCTGTCGTCGCAGAAGCAATGCTTGAATTTCTCATTATCAACAAGAAGAGGATTTTAACTGCCTTCCCTAACTTAATGCCTCAGTTTTTTCCATTGTTGTTAAAACTGATAGCTTGGAATGGTGAAAGATTAGAAAAACAAATTTTGAAAGCCTTTCCAGGATTGATGTCACCTGGGTCATTTATTCCATTGTTTCCATCTTTACTAGACTTGCCTATTTTGGTCGTGGCATTGGAGAAGGTGGAAAAAAGCTCTGGACCACTAATTGGAAGCAGCATTGCTTCGATTCAGAAAAATACAGCTCCTAAGATGCTACTTGCCCTTATGGATGAAGCATATACTGGTTCAACTATAGAAGATGGTGGTGGAGATTCTGAATTTGAGGATAGCAGTGCAATTGATGTGTCTGATCCTTTGTTCCTCGAGATCTTAAAGGATGAAAATGATGGCATCGCTGAACGGCCCTGGTCATCACCATTGATGACCACAATATTACAGGCTGCAGTCAATAATCCTTACTCTGATAGGCTGAAAGCAGTACTCCGCCTTACACCTCGTCTTCTTGATGTATACTTTTCTATAGCATTGCGCGATGTGAATGATTCTTTGATCTGTGCGTTGGTTCCCCTACTTTTGTCAAGATTTGCAACAATATTTCCAGACAAAATATTTTCTTATGAGGTTCATAAACGGCTTTTGGAGTTTATACTCTCCACATTTCAGCGCTACCCAAACTTCATTGCCCTTTTAAAGAAACCTATAATGGACAGACTTGGAGAAGCTTATGACAGCCCAGACAAGACAGAATTGGCATTGCAATTATGTTGGGCCATTGGAGAGCATGGCGGTGGTGGTGGATCTCACAAAGATGAAGCCCGTGAACTTTTTGAGAGTTTAGAACTACTTCTGTATGAAAACCTTTCCTCAAGTCGTCTGGGCATGGCACAGGAGGTATCCCTTAGTTCTGATAAGGATACCTACAGAAGGTCATCGCAGTCCAGGCTTATGTGTTTTGTTGTAACGGCCATTGCAAAGCTTGCCACACATCATCGTGAATTACTACCTAGAGCACGTGTATCTTTGGGCAAGGTTGCTCGGTCTCGAATTTCTGATATGCGAGTATGGAGGCGTGCATGTGATTACCTGGGTTTGATGAAAGATCCTGCTATATGTTCATCCATATTAGGGCCTTCACGACCTTCACAAGGTACCACACAGAAAATTGGGAGCATAAACTGGAATGAAGGTGCAACAAAGATGATCGCACATATTCCATTTTACATTCTAGGTGAACAAGAAGGACCACCTTTTCATGATTTCTCTTTCTCGGATATCCTTTCAAGCAGATGA 1707 0.4241 MSERDAGWDFHLRTLSISARDSNIANDPASDPSLLQSVKKLHELCKAENNEDLVARVYPQINKIFQRAVASLSQSQTSNGLLLIAILQFYLDFGEVVLHDADPSLRTFFRSCLSREFADPVVAEAMLEFLIINKKRILTAFPNLMPQFFPLLLKLIAWNGERLEKQILKAFPGLMSPGSFIPLFPSLLDLPILVVALEKVEKSSGPLIGSSIASIQKNTAPKMLLALMDEAYTGSTIEDGGGDSEFEDSSAIDVSDPLFLEILKDENDGIAERPWSSPLMTTILQAAVNNPYSDRLKAVLRLTPRLLDVYFSIALRDVNDSLICALVPLLLSRFATIFPDKIFSYEVHKRLLEFILSTFQRYPNFIALLKKPIMDRLGEAYDSPDKTELALQLCWAIGEHGGGGGSHKDEARELFESLELLLYENLSSSRLGMAQEVSLSSDKDTYRRSSQSRLMCFVVTAIAKLATHHRELLPRARVSLGKVARSRISDMRVWRRACDYLGLMKDPAICSSILGPSRPSQGTTQKIGSINWNEGATKMIAHIPFYILGEQEGPPFHDFSFSDILSSR 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02150 568 SUPERFAMILY ARM repeat 55 424 IPR016024 -
Trre7g02150 568 PANTHER AP-5 COMPLEX SUBUNIT ZETA-1 1 565 - -
Trre7g02150 568 Pfam AP-5 complex subunit, vesicle trafficking 30 154 IPR028222 GO:0044599
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02150 Trre-Chr7 17074524 17082361 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02150 K19025 - gmx:100796067 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02150 7 17074524 17082361 Trre7g02150 7 17074524 17082361 ECH