Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02051 ATGGACACCAACCGCATCTTCCGGCGAACCGAGATCCTCACCAACCACCTCCGTCACGATCCACCAACAGCAACAACAATTCTACAACACAACGTTTGCCTATGCTACTCACCTCCAGAGCTATCGGAATCAAATCCGGTAAAATTCGATGTGCGAGAGATGCGGAAGCTGTTAGACGGCCACAATTTGGAAGAACGCGACTGGCTATTCGGATTAATCATACAGAGCGGACTCTTCAACCGACGGGAAGTCGACGGACGTGTGTTTGTTTCCCCTGATTATAATCAGTCGATGGAACAACAGCGAGAGATGACGATGAAGCGAATCGCTTATTTGTTGGATCGCGGTGTGTTTCGTGGTTGGCTTACTGGTGATGGTCCACAAGAAGAGTTGAGGAAATTGGCTCTTCATGAGGTTATTGGAATGTATGATCACTCTCTTGCTGTTAAGCTTGGCGTTCATATCTTCTTGTGGGGCGGGGCTGTGAAGTTTCTGGGAACCAAGCGTCACCATGACAAGTGGTTGAGAGCTACTGAAAACTATGACATGAAGGGTTGTTTTGCTATGTCTGAGTTGGGCCATGGAAGTAATGTCCGAGGAATTGAAACAATCACTACTTATGATCCAACTACTGGAGAATTTGTTATCAATACTCCGTGTGAGTCAGCTCAGAAGTATTGGATCGGTGGTGCAGCAAATCATGCAACACATACTATAGTTTTTTCACAACTCAACATAAATGGAAGCAACCAAGGGGTGCATGCTTTTATTGCCCAAATCAGGGACTTAGATGGAAACATATGCCCAAATATCCGAATAGCCGAATGTGGTCATAAAATTGGTTTAAACGGGGTTGATAATGGCCGTATCTGGTTTGACAATGTGAGAATACCCAGAGAAAATTTGTTGAATTCTGTAGCTGACGTTTCACCAAGTGGCGAATATTTGAGTGCAATAAAAAATACAGATCAGAGGTTTGCAGCATTCTTAGCCCCTTTGACCTCTGGTCGTGTAACTATTGCCGTCAGTTCTGTGTACATCTCCAAAATTAGTTTAGCCATTGCTATAAGATATGCATTGACAAGGCGGGCCTTTTCTATTGCTCCAAATGGGCCTGAAGTTTTACTGCTTGACTACCCAAGTCATCAACAGCGACTATTGCCTTTACTTGCTAAGATATACGCAATGAGTTTTGCTTCAATTGAGCTCAAAATGATGTATGTGAATAGAACACCCGAGTCAAACAAAGCAATTCATATTGTTTCTAGTGCATACAAGGCTACTTTTACATGGAATAATATGCGCACTCTTCAGGAATGTCGTGAAGCATGCGGGGGACAAGGCATCAAAACTGAAAACCGTATTGGTCAATTCAAGGGTGAATATGATGTGCATTCAACATTTGAGGGGGACAACAATGTTCTGATGCAGCAGATAAGCAAGGCACTCCTCGCAGAATACATAGCATGTCAGACAAAAAACAAGCCATTTAAAGGTCTAGGATTAGAACACATGAACAAATCTTGTCCGGTCATCCCATCTCAGTTAACAAGTTCTACCATCAAGAGCAGTGAATTTCAGATTGATCTATTCCACCTAAGAGAGCGAGATCTATTGAAACGTTTTGCTGAAGAGGTTTCAGAACATCAAGCTCAAGGAAATAGCAAAGAGTCTGCCTTTATTCTTAGTTATCAACTTGCCGAGGACTTGGGCAGAGCTTTCTCTGAACGAGCAATACTGAAAACATTTATGGAGGCGGAGTCAGCTTTACCAGATGGTTCATTGAAGGATGTCTTAGGTCTCTTAAGATCGTTATACGCTTTGATTTGTGTGGATGAAGATGCTGCCTTTCTCCGATACGGGTACTTGTCAACAGAGAATGCTTCTGCAGTGAGGAAAGAAGTGCCAAAACTATGTGCTGAACTTCGACCACATGCACTTGCCCTGGTTAATTCCTTTGGTATTCCTGATGCTTTTTTGAGCCCCATCGCATACAATTGGATTGAGTCAAATTCTTGGTCAACTGCTCAAAATTAA 2037 0.4296 MDTNRIFRRTEILTNHLRHDPPTATTILQHNVCLCYSPPELSESNPVKFDVREMRKLLDGHNLEERDWLFGLIIQSGLFNRREVDGRVFVSPDYNQSMEQQREMTMKRIAYLLDRGVFRGWLTGDGPQEELRKLALHEVIGMYDHSLAVKLGVHIFLWGGAVKFLGTKRHHDKWLRATENYDMKGCFAMSELGHGSNVRGIETITTYDPTTGEFVINTPCESAQKYWIGGAANHATHTIVFSQLNINGSNQGVHAFIAQIRDLDGNICPNIRIAECGHKIGLNGVDNGRIWFDNVRIPRENLLNSVADVSPSGEYLSAIKNTDQRFAAFLAPLTSGRVTIAVSSVYISKISLAIAIRYALTRRAFSIAPNGPEVLLLDYPSHQQRLLPLLAKIYAMSFASIELKMMYVNRTPESNKAIHIVSSAYKATFTWNNMRTLQECREACGGQGIKTENRIGQFKGEYDVHSTFEGDNNVLMQQISKALLAEYIACQTKNKPFKGLGLEHMNKSCPVIPSQLTSSTIKSSEFQIDLFHLRERDLLKRFAEEVSEHQAQGNSKESAFILSYQLAEDLGRAFSERAILKTFMEAESALPDGSLKDVLGLLRSLYALICVDEDAAFLRYGYLSTENASAVRKEVPKLCAELRPHALALVNSFGIPDAFLSPIAYNWIESNSWSTAQN 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02051 678 PIRSF Acyl-CoA_oxidase 30 678 IPR012258 GO:0003997|GO:0005777|GO:0006631|GO:0071949
Trre7g02051 678 Gene3D - 185 333 IPR046373 GO:0016627
Trre7g02051 678 FunFam Acyl-coenzyme A oxidase 329 493 - -
Trre7g02051 678 Gene3D - 525 654 - -
Trre7g02051 678 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 325 497 IPR036250 GO:0016627
Trre7g02051 678 PANTHER ELECTRON TRANSPORT OXIDOREDUCTASE 39 663 IPR012258 GO:0003997|GO:0005777|GO:0006631|GO:0071949
Trre7g02051 678 Pfam Acyl-CoA dehydrogenase, C-terminal domain 328 484 IPR009075 GO:0016627
Trre7g02051 678 FunFam Acyl-coenzyme A oxidase 185 321 - -
Trre7g02051 678 Pfam Acyl-CoA dehydrogenase, middle domain 186 295 IPR006091 GO:0016627
Trre7g02051 678 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 523 664 IPR036250 GO:0016627
Trre7g02051 678 Pfam Acyl-CoA oxidase 525 660 IPR002655 GO:0003997|GO:0005777|GO:0006635
Trre7g02051 678 Gene3D - 334 493 - -
Trre7g02051 678 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 94 309 IPR009100 GO:0016627
Trre7g02051 678 FunFam Acyl-coenzyme A oxidase 525 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02051 Trre-Chr7 16231218 16236764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02051 1 676 Acyl Lipid Metabolism Gene Families AT1G06290 71.640 0.0 1063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02051 K00232 - gmx:100790627 1179.85