Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01959 ATGAAGCTTGGTTGCCTAATTTCTGGTTACAATAATCTCGTCTCAATTAAGGATAGCGTAAAAAGGGAAGATAATCATCATGAGTTGAAGCTGATTCCTATAATAAAGACAAAACAAGTCAAGCTGTTTTTCAACACCGTCGCTCCTCCTCTTGCTGCTGCTGCCTTTCTTCTCTTTTCTCCAATTTCCGCCACTCCGGTTTCAAGTGCTCAAACAATAGATATCCAAAGGGGAGCCACATTGTTCCGCCAAACATGTATTGGATGTCATGATGCAGGTGGAAACATTATTCAACCAGGGTCAACTTTATTCACAAAGGATTTACAAAGAAATGGAGTTGATACAGAAGAAGAAATCTACCGTGTCACATACTATGGAAAAGGAAGAATGCCGGGGTTTGGTAAAGAGTGCACACCACGAGGCCAGTGCACATTTGGAGCTCGTTTAGAAGATGAAGAGATCAAGATATTAGCCGAGTTTGTTAAGTTACAGGCTGATCAAGGGTGGCCAAGTATAGAAACCGGAGAAAAATGA 534 0.4139 MKLGCLISGYNNLVSIKDSVKREDNHHELKLIPIIKTKQVKLFFNTVAPPLAAAAFLLFSPISATPVSSAQTIDIQRGATLFRQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKGRMPGFGKECTPRGQCTFGARLEDEEIKILAEFVKLQADQGWPSIETGEK 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01959 177 PANTHER CYTOCHROME C6, CHLOROPLASTIC 25 174 IPR023655 GO:0005506|GO:0009055
Trre7g01959 177 FunFam Cytochrome c6, chloroplastic 71 175 - -
Trre7g01959 177 ProSiteProfiles Cytochrome c family profile. 73 165 IPR009056 GO:0009055|GO:0020037
Trre7g01959 177 Gene3D - 71 175 IPR036909 GO:0009055|GO:0020037
Trre7g01959 177 Pfam Cytochrome C oxidase, cbb3-type, subunit III 74 139 IPR009056 GO:0009055|GO:0020037
Trre7g01959 177 SUPERFAMILY Cytochrome c 53 170 IPR036909 GO:0009055|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01959 Trre-Chr7 15467276 15470902 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01959 K08906 - gmx:100797820 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01959 7 15467276 15470902 Trre7g01959 7 15467276 15470902 ECH