Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01933 ATGGCTGCTTCTACTTCTTCAAACTTCTCAGCATCTTTGCAGAGAGATACAAAGAAAACAAACTATCATTCTTTGCTAGGAAATATACCTTTGCACACTAAACTTGGTTTCTCATCTTCTGTGAAATTCAATAAATCTGTAATAAGTGTGAAATCTTATGGTACTTCAAAGTATGATGAAGTAGTGGTGGATGAAGAATTGGACAAGATTAGGAGGCTTCAAAATGGTTCTGATGTTAGAGGAATTGCATTGGAAGGTGAGAAAGGAAGAACAGTTGACCTCACTCCACCTGCCGTGGAGGCAATATCAGAGAGTTTTGGCGAATGGGTTATCAATGGTTTAGAGAAGCAAAAAGGATATCCGGTAGAGAATGTGAGTGTTTCTCTTGGACGTGACCCTCGAATTACAGGGTCGAAATTGAGCGTTGCAGTGTTTGCAGGTCTTGCTCGTGCTGGTTGTATGATTTTTGATATGGGACTTGCTACCACACCAGCTTGTTTTATGAGCACATTATTGCCTCCATTTGTCTATGATGCTTCAATAATGATGACAGCGTCTCATCTACCTTACACACGTAATGGTTTGAAATTTTTTACAAAGAGAGGGGGGCTGACATCATTGGAGGTAGAAGAAGTATGCGACATAGCAGCTCGTAAATATGCAAACAGGATGGCCAAAGTGTCTACTCTGCTTAAAGTACTTCCAACAAGAGTTGATTTCATGAGTGCTTATTCAAAACACCTACGAGAAATCATCAAGGAGAGAATAAGTCATCCTTTGCATTATGAAACTCCACTCGAGGGATTCCAGATAATAGTGAATGCTGGAAATGGCTCAGGAGGATTCTTCACATGGGATGTCTTAGACAAGCTTGGTGCAGATACCTTTGGATCTCTTCATCTTAAACCTGATGGCATGTTTCCCAATCACATTCCCAACCCTGAGGACAAAATTGCCATGGCGATGACAAGAGCAGCAGTGTTAGAATACTCGGCTGATCTTGGAATAGTCTTTGATACTGATGTAGACAGAAGCGGCGTCGTTGATAACAAAGGGAACTCAATAAATGGTGACAAGCTCATTGCTCTCATGTCTGCCATTGTATTGAAAGAAAATCCAGGATCAACCATAGTGACTGATGCTCGTACAAGTATGTCGCTCACTAAATTTATAACGGATAGAGGTGGTCACCATTGCTTATATCGTGTCGGTTACCGAAATGTTATTGACAAAGGAGTTCAGCTTAATAAGGACGGAATCGAAACACATCTTATGATGGAAACATCTGGTCATGGTGCTTTGAAAGAAAACCATTTCCTTGATGACGGGGCCTATATGGTGGTGAAAATTATAATTGAAATGGTAAGAATGAAGCTTGGTGGATCGGATGAAGGGATTGGCAGTCTTATAAAAGATCTTGAAGAGCCTTCTGAATCAGTTGAACTAAGGATAAATATCGTTTCTGAACCTCGATATGCTAAAGCAAAAGGATCAGAGGCCATCGAAACATTTCGAAACTACATCGAGGAAGGGAAACTTAAAGGATGGGAGTTGGACTCATGTGGTGATTGTTGGGTGAGTGAAGGGTGTCTTGTTGATACAAATGACACCCCAACTCACATTGATGCTCAAATGTACAGGGCAAAAGTATCAAACAATGAACATGGACAGCATGGTTGGGTACATGTGAGGCAGAGTATTCACAACCCAAACATTGCTGTTAACCTGCAATCATCTATTCAAGGAGGCTGCTTGTCTATGGCAAGAGATTTCAGAGATAATTTTCTCAAAGCAAGTGGAGTTGATACATTCCTAGACATTGCTCAAATTGATAAGTTTGTTGAAAATGGCCCATTAGCCTGA 1863 0.4074 MAASTSSNFSASLQRDTKKTNYHSLLGNIPLHTKLGFSSSVKFNKSVISVKSYGTSKYDEVVVDEELDKIRRLQNGSDVRGIALEGEKGRTVDLTPPAVEAISESFGEWVINGLEKQKGYPVENVSVSLGRDPRITGSKLSVAVFAGLARAGCMIFDMGLATTPACFMSTLLPPFVYDASIMMTASHLPYTRNGLKFFTKRGGLTSLEVEEVCDIAARKYANRMAKVSTLLKVLPTRVDFMSAYSKHLREIIKERISHPLHYETPLEGFQIIVNAGNGSGGFFTWDVLDKLGADTFGSLHLKPDGMFPNHIPNPEDKIAMAMTRAAVLEYSADLGIVFDTDVDRSGVVDNKGNSINGDKLIALMSAIVLKENPGSTIVTDARTSMSLTKFITDRGGHHCLYRVGYRNVIDKGVQLNKDGIETHLMMETSGHGALKENHFLDDGAYMVVKIIIEMVRMKLGGSDEGIGSLIKDLEEPSESVELRINIVSEPRYAKAKGSEAIETFRNYIEEGKLKGWELDSCGDCWVSEGCLVDTNDTPTHIDAQMYRAKVSNNEHGQHGWVHVRQSIHNPNIAVNLQSSIQGGCLSMARDFRDNFLKASGVDTFLDIAQIDKFVENGPLA 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01933 620 CDD PMM_PGM 73 593 - -
Trre7g01933 620 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 72 220 IPR005844 GO:0005975|GO:0016868
Trre7g01933 620 PRINTS Phosphoglucomutase/phosphomannomutase family signature 303 316 IPR005841 GO:0005975|GO:0016868
Trre7g01933 620 PRINTS Phosphoglucomutase/phosphomannomutase family signature 179 193 IPR005841 GO:0005975|GO:0016868
Trre7g01933 620 PRINTS Phosphoglucomutase/phosphomannomutase family signature 268 287 IPR005841 GO:0005975|GO:0016868
Trre7g01933 620 PRINTS Phosphoglucomutase/phosphomannomutase family signature 332 347 IPR005841 GO:0005975|GO:0016868
Trre7g01933 620 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 356 456 IPR005846 GO:0005975|GO:0016868
Trre7g01933 620 FunFam Phosphomannomutase/phosphoglucomutase isoform B 349 470 - -
Trre7g01933 620 SUPERFAMILY Phosphoglucomutase, first 3 domains 356 458 IPR016055 GO:0005975|GO:0016868
Trre7g01933 620 FunFam phosphomannomutase/phosphoglucomutase isoform X1 74 229 - -
Trre7g01933 620 Gene3D - 349 471 - -
Trre7g01933 620 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 243 352 IPR005845 GO:0005975
Trre7g01933 620 PANTHER PHOSPHOHEXOSE MUTASE 66 613 - -
Trre7g01933 620 Gene3D - 74 229 - -
Trre7g01933 620 SUPERFAMILY Phosphoglucomutase, first 3 domains 77 252 IPR016055 GO:0005975|GO:0016868
Trre7g01933 620 Gene3D - 270 347 - -
Trre7g01933 620 FunFam phosphomannomutase/phosphoglucomutase isoform X1 270 347 - -
Trre7g01933 620 SUPERFAMILY Phosphoglucomutase, first 3 domains 243 354 IPR016055 GO:0005975|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01933 Trre-Chr7 15256583 15260310 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01933 - - gmx:100810397 1087.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01933 7 15256583 15260310 Trre7g01933 7 15256583 15260310 ECH