LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre7g01927	ATGGGTATGCTTAGTTCGGATCAGCTTCAATCCTTCAACTCTCAAGGTTATCTTGTGATTGAATCGTTTGCTAGTGAGGATCAAATTCAGAGCATGATCAACAGGATGGAACAGTTGGTCGATGAATTTGATCCTTCTTCCACCGCCTCTATTTTCTCCACCAAAAACCAGCAAAAGTTGACTGATGATTATTTTTTCGAGAGTGCAGAAAGAATTTCGTTCTTCTTCGAAGAGAAAGCATTTGGGGATGATGGTAACTTAAAGCAGCCAAAGCAATTTTCCCTCAATAAAGTTGGCCATGCACTTCATGAGATTGAGCCTGCATTTAAGAAGTTTTCTTCTTCTGAGAAGGCTTCAAGTTTAATGAGCTCCTTAGGTTACAAGAGACCGGTGATTATGCAGTCTATGTATATATTTAAGCAACCTGGAATTGGGGGTGAAGTGGTGCCGCATCAAGATAACTCATTTATTTATACTGAACCACAAACATGCACCGGGCTGTGGCTGGCTTTAGAAGATGCCACGATATTAAATGGTTGCCTTTGGGCAATTCCTGGATCTCACAAAAATGGGCTTCTTAGAAGATTCGTAAGAGATGAAAATGGCGTCAAATTTGATAGACCTTCACCATCTTATGATCAGAAAGATTTTGTTCCTATTGAAGTAAAAGCTGGATCTTTGGTTGTCATCCATGGCGATCTTATCCACCAAAGCTTTGAAAACCAGTCCACAAAATCAAGACATGCATATAGCTTGCATGTGGTAGATACAGATGGCTGCAAATGGGCACCAGAAAATTGGATCAGACGGAAAGTGGAGCCAGAACCACTCTATGTAAACTAA	843	0.4057	MGMLSSDQLQSFNSQGYLVIESFASEDQIQSMINRMEQLVDEFDPSSTASIFSTKNQQKLTDDYFFESAERISFFFEEKAFGDDGNLKQPKQFSLNKVGHALHEIEPAFKKFSSSEKASSLMSSLGYKRPVIMQSMYIFKQPGIGGEVVPHQDNSFIYTEPQTCTGLWLALEDATILNGCLWAIPGSHKNGLLRRFVRDENGVKFDRPSPSYDQKDFVPIEVKAGSLVVIHGDLIHQSFENQSTKSRHAYSLHVVDTDGCKWAPENWIRRKVEPEPLYVN	280

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre7g01927	280	Gene3D	q2cbj1_9rhob like domain	1	278	-	-
	Trre7g01927	280	PANTHER	PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1	4	263	-	-
	Trre7g01927	280	Pfam	Phytanoyl-CoA dioxygenase (PhyH)	12	249	IPR008775	-
	Trre7g01927	280	SUPERFAMILY	Clavaminate synthase-like	2	274	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre7g01927	Trre-Chr7	15183480	15186862	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre7g01927	K00477		-	gmx:100788875	508.064

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Trre7g01927	7	15183480	15186862	Trre7g01927	7	15183480	15186862	ECH