Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01921 ATGGGGAAAAAACTTGGACCGGACCCTCCGAACCTCAAGAAATACGGTGTTCCTTTATACTCAGTTGCTTGGGTTCCCCAAACCGTTCTCAAATCGATCCAAAATGTAACCGTCGATGATTCCTCCGACGCCGATCATAAATCATTACCGGAGACGGCACCACTTGACGACGGGAAGTACCTCGTGTTCGCCGGTGGCGGTGGTCCGGGAAGCAGCGGTATACCTAATTCTTTATTGCTTGCGCACTTCGATGTTGCGTCTGATTCTCTCTCTGATCCACCGGTGTATAAGCTAGGAACTAATTCCGAGTTGCCTTATAGAATGACAGTTCACCCCAATGGAGATGGTATTATTTGTGCGATGGAAACGGTAGAGAGTTGCAGATGGTTTGACTGGGATCAAAACGAGGATGCTGAAATTCACAAGTTGGGTCTGAGGTTGTCAGAGAGAGTGCTCACCGAGTTGGATAATGTTGGACTACAATTAGCTTTGGCATTCAACAATGATGGTACTACACTAGCTGCTGGTGGAGAGGATGGCAGTCTAAGGGTTTTCAAGTGGCCTAGCATGGAAAATATTATCAACGAGTCTAATGCTCATTCTACTGTAAAGGACTTGCATTTCAGTTTTGATGGCAAGTTGATTGTCTCTTTGGGAGGTAGTGGCCCTTGCAGGGTTTGGGACGTTTCTTCAGCAATAGCTTTGGCTACTCTAGCAAATGAAAATCGTGAAGTTTTTAGCTCTTGCAGATTTTCTCAACTAAATGACGGGACTCGAGTTCTATATATTGTTGCCAAGACAGAAAAAGGTGGAAGCATAGTGACCTGGAATACACAAACATGGGAAAGGATTAGCTCGAAGTATATTTCGCGTGATGTAATATGTGCATTCAATGTCTCAGCTGATGGAAAATTTCTGGCATGTGGAACACCTTCCGGAGAGATTATAATTGTAAATTCAACAAATATGCATATTCATACAAAGATAAAAAAGGCTCACCTTGGCATAATAACTGCTTTAGCTTTTTCCCCTGATTCAAGGGCATTGGCTTCTGTATCCTTCGATTCAAGTGCAAGGATAACAGTAATTGAAGAGAAGAAAAGTGGAGGGCTGAGCTTGTGGTTTGCAGTACTTATCATCCTGCTTGCAGTAGCTGCTTACTTCCTGAAGGTTGAAGGAATTGAAAAGTTAAGGCTCCAATATTACAATCAAATATAG 1218 0.4319 MGKKLGPDPPNLKKYGVPLYSVAWVPQTVLKSIQNVTVDDSSDADHKSLPETAPLDDGKYLVFAGGGGPGSSGIPNSLLLAHFDVASDSLSDPPVYKLGTNSELPYRMTVHPNGDGIICAMETVESCRWFDWDQNEDAEIHKLGLRLSERVLTELDNVGLQLALAFNNDGTTLAAGGEDGSLRVFKWPSMENIINESNAHSTVKDLHFSFDGKLIVSLGGSGPCRVWDVSSAIALATLANENREVFSSCRFSQLNDGTRVLYIVAKTEKGGSIVTWNTQTWERISSKYISRDVICAFNVSADGKFLACGTPSGEIIIVNSTNMHIHTKIKKAHLGIITALAFSPDSRALASVSFDSSARITVIEEKKSGGLSLWFAVLIILLAVAAYFLKVEGIEKLRLQYYNQI 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01921 405 SMART WD40_4 280 319 IPR001680 GO:0005515
Trre7g01921 405 SMART WD40_4 322 362 IPR001680 GO:0005515
Trre7g01921 405 SMART WD40_4 190 228 IPR001680 GO:0005515
Trre7g01921 405 SMART WD40_4 148 186 IPR001680 GO:0005515
Trre7g01921 405 FunFam SEC12-like protein 2 54 367 - -
Trre7g01921 405 PANTHER PROLACTIN REGULATORY ELEMENT BINDING PROTEIN 11 389 IPR045260 GO:0005085
Trre7g01921 405 Pfam WD domain, G-beta repeat 331 360 IPR001680 GO:0005515
Trre7g01921 405 Pfam WD domain, G-beta repeat 163 185 IPR001680 GO:0005515
Trre7g01921 405 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 53 360 IPR011047 -
Trre7g01921 405 Gene3D - 51 369 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01921 Trre-Chr7 15102538 15107869 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01921 K14003 - gmx:100786727 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01921 7 15102538 15107869 Trre7g01921 7 15102538 15107869 ECH